Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 18.02 | 6.67 |
| GSMUA_Achr7P04660_001 | Banana | golgi, mitochondrion | 20.72 | 5.23 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP02980_001 | EnsemblPlants:GSMUA_AchrUn_randomT02980_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG02980_001 | InterPro:Band_7_C | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF10 |
| PFAM:PF16200 | UniParc:UPI0002959724 | UniProt:M0U5W0 | MapMan:35.2 | : | : |
Description
Putative Stomatin-like protein 2 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG02980_001]
Coordinates
chrchrUn_random:-:14477121..14477622
Molecular Weight (calculated)
11631.7 Da
IEP (calculated)
4.737
GRAVY (calculated)
-0.222
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVASAASLR IAEQYIKAFG CIAKEGTTLL LPSAVGNPSS MITQALAIYK KLNVDNTSAP LAENPHPETS EESKSNGDSR IDALGTSSDM ASVSDPSERV
101: FSLQSPPKGL S
101: FSLQSPPKGL S
001: MNQLALSRSG YTAAVRFLPM LSAAVPKILS SLAAASTVRN FSSTGSPLTS YQINKPSPSK SFTSRLLHQS SSAGTPPQQL FGARSFSSPS SDFNSYHINP
101: PSNWGIRIVP ERKACVIERF GKFHTTLPAG IHFLVPFVDR IAYVHSLKEE AIPIGNQTAI TKDNVSIHID GVLYVKIVDP KLASYGVENP IYAVMQLAQT
201: TMRSELGKIT LDKTFEERDT LNEKIVEAIN VAAKDWGLQC LRYEIRDIMP PNGVRVAMEM QAEAERKKRA QILESEGERQ AHINRADGKK SSVILESEAA
301: MMDQVNRAQG EAEAILARAQ ATAKGLAMVS QSLKEAGGEE AASLRVAEQY IQAFGKIAKE GTTMLLPSNV DNPASMIAQA LGMYKGLSTK VPTVVSGKLL
401: E
101: PSNWGIRIVP ERKACVIERF GKFHTTLPAG IHFLVPFVDR IAYVHSLKEE AIPIGNQTAI TKDNVSIHID GVLYVKIVDP KLASYGVENP IYAVMQLAQT
201: TMRSELGKIT LDKTFEERDT LNEKIVEAIN VAAKDWGLQC LRYEIRDIMP PNGVRVAMEM QAEAERKKRA QILESEGERQ AHINRADGKK SSVILESEAA
301: MMDQVNRAQG EAEAILARAQ ATAKGLAMVS QSLKEAGGEE AASLRVAEQY IQAFGKIAKE GTTMLLPSNV DNPASMIAQA LGMYKGLSTK VPTVVSGKLL
401: E
Arabidopsis Description
At5g54100 [Source:UniProtKB/TrEMBL;Acc:Q9LVW0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.