Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G003600.1 | Wheat | plastid | 97.8 | 98.73 |
| TraesCS2A01G014200.1 | Wheat | plastid | 97.49 | 97.8 |
| HORVU2Hr1G002480.5 | Barley | cytosol | 65.31 | 97.42 |
| HORVU2Hr1G002410.2 | Barley | plastid | 96.55 | 89.26 |
| Os08t0243900-01 | Rice | plasma membrane, plastid | 88.85 | 88.3 |
| EES14778 | Sorghum | plastid | 87.76 | 87.76 |
| Zm00001d024416_P001 | Maize | plasma membrane | 87.6 | 87.6 |
| GSMUA_Achr3P27960_001 | Banana | plastid | 67.03 | 65.19 |
| VIT_11s0052g00920.t01 | Wine grape | mitochondrion | 56.04 | 57.49 |
| KRG90331 | Soybean | endoplasmic reticulum | 56.2 | 56.83 |
| KRH02873 | Soybean | endoplasmic reticulum, nucleus | 54.95 | 55.56 |
| PGSC0003DMT400029685 | Potato | cytosol, plastid | 54.79 | 54.96 |
| Solyc10g078790.1.1 | Tomato | nucleus | 54.32 | 54.49 |
| CDX88623 | Canola | plastid | 54.47 | 54.13 |
| CDY11868 | Canola | plastid | 54.63 | 54.12 |
| AT5G57460.1 | Thale cress | cytosol | 54.79 | 54.02 |
| Bra006819.1-P | Field mustard | plastid | 54.47 | 53.97 |
| Bra002727.1-P | Field mustard | plastid | 54.16 | 53.91 |
| CDY38299 | Canola | plastid | 54.0 | 53.5 |
| CDY25907 | Canola | plastid | 53.69 | 53.02 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G014900.1 | EnsemblPlantsGene:TraesCS2D01G014900 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005886 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016020 | InterPro:AP2_Mu_C_sf | InterPro:IPR028565 |
| InterPro:MHD | InterPro:Muniscin_C | PANTHER:PTHR37769 | PFAM:PF10291 | PFscan:PS51072 | SEG:seg |
| SUPFAM:SSF49447 | MapMan:22.1.4.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:7167600..7169513
Molecular Weight (calculated)
67529.7 Da
IEP (calculated)
6.135
GRAVY (calculated)
-0.030
Length
637 amino acids
Sequence
(BLAST)
(BLAST)
001: MACLAISLQP VNGPDILLQT RSWFPVSRAL AAVSAFRLAR LSLARGKQPH ASPSSSASLD AIGDDPLATG SGQLVVGVES QYRVVYRLVN SIYVLGVTTA
101: SDHAAPAVHA FAVADAVNQA VSVLVAACRG VDATPDKVHR KYPEVYLALD LVLHGVGSVR LSQILATIHG DNLARMVNSS PDAEARARGA DSWPVVEHLA
201: QDRHAARDGF AGASFELPQE TLSAGDEFSA SSLAPAAAAA TGDEPPPEEA PPIEKDPFAA SDMVASKPEE ALVGAFKKNK ETALVVADPA AALAGLEVTT
301: LPPAEATKPT FIGVEGFEGD YGGIEFGNEE ASLAEAFEGF NAPFGGGLDA SEFVTTTKKD HKDKTLTGLE ILAMSGGQAP NAASSGSQLD SLVTPSKDMT
401: VPELCIVEEI NAEFKESVLA RVGLKGTIIL RTLPPKKAAG RETEFSFRLE GTSGMKRAAL QSTVLSSLEN GLFHVKTPSK EEPIPIMKYS FLPKHSPLPL
501: RLRLVKRHSG TLLSLMIHYA SNPMLPQPLS NVTFIVKLPV DPTLLNVSPK AVLNRAEREL RWHISDIPLK GPAGRLRARM PVDQDSKDGE LEVVGMVKFA
601: YQGPFTLSGI KLCPAINSTA QFNEVGHTFS SGSYRCI
101: SDHAAPAVHA FAVADAVNQA VSVLVAACRG VDATPDKVHR KYPEVYLALD LVLHGVGSVR LSQILATIHG DNLARMVNSS PDAEARARGA DSWPVVEHLA
201: QDRHAARDGF AGASFELPQE TLSAGDEFSA SSLAPAAAAA TGDEPPPEEA PPIEKDPFAA SDMVASKPEE ALVGAFKKNK ETALVVADPA AALAGLEVTT
301: LPPAEATKPT FIGVEGFEGD YGGIEFGNEE ASLAEAFEGF NAPFGGGLDA SEFVTTTKKD HKDKTLTGLE ILAMSGGQAP NAASSGSQLD SLVTPSKDMT
401: VPELCIVEEI NAEFKESVLA RVGLKGTIIL RTLPPKKAAG RETEFSFRLE GTSGMKRAAL QSTVLSSLEN GLFHVKTPSK EEPIPIMKYS FLPKHSPLPL
501: RLRLVKRHSG TLLSLMIHYA SNPMLPQPLS NVTFIVKLPV DPTLLNVSPK AVLNRAEREL RWHISDIPLK GPAGRLRARM PVDQDSKDGE LEVVGMVKFA
601: YQGPFTLSGI KLCPAINSTA QFNEVGHTFS SGSYRCI
001: MSCLALALQP ANGSDILLQT REWFPPARAL IALSYFRQMR QALASSKQQH QQQSNQKQNQ ASSSSSSSSS VADPDDATAA EFVGDDPLAA SNGQVIVGVE
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
Arabidopsis Description
At5g57460 [Source:UniProtKB/TrEMBL;Acc:Q9FKM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.