Factsheet for TraesCS4A01G328600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G542600.1	Wheat	nucleus	84.45	89.82
TraesCS5D01G545200.1	Wheat	cytosol	81.1	85.18
Os03t0851700-01	Rice	plasma membrane	63.88	76.29
HORVU5Hr1G122820.3	Barley	cytosol	73.21	75.74
EER93086	Sorghum	cytosol	62.92	74.93
GSMUA_AchrUn_...	Banana	nucleus	53.11	65.49
GSMUA_Achr8P09410_001	Banana	cytosol	51.2	62.76
TraesCS5A01G296900.1	Wheat	plastid	49.28	62.42
PGSC0003DMT400061066	Potato	cytosol	51.44	61.25
VIT_03s0038g04270.t01	Wine grape	cytosol	52.15	60.89
PGSC0003DMT400062098	Potato	cytosol	50.0	60.06
KRH56373	Soybean	cytosol	50.24	59.66
KRH62564	Soybean	nucleus	49.76	59.43
AT2G17390.1	Thale cress	cytosol	46.89	56.98
CDY41654	Canola	cytosol, plastid	45.93	56.97
CDY24811	Canola	cytosol, plastid	47.37	56.9
CDX72536	Canola	cytosol, plastid	46.89	56.81
CDX69141	Canola	cytosol, plastid	46.89	56.65
Bra017710.1-P	Field mustard	cytosol, plastid	47.37	56.57
CDX75504	Canola	cytosol, plastid	46.65	56.36
AT4G35450.5	Thale cress	cytosol, plastid	47.13	56.29
Bra010534.1-P	Field mustard	cytosol, plastid	46.89	56.16
CDY40634	Canola	cytosol, plastid	46.89	56.16
Bra011616.1-P	Field mustard	cytosol, plastid	46.41	56.07
CDY49426	Canola	cytosol	44.26	54.41
CDY24333	Canola	plastid	44.5	54.39
TraesCS2A01G130700.1	Wheat	cytosol	9.57	26.85

Protein Annotations

Gene3D:1.25.40.20	MapMan:23.1.1.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
PFAM:PF12796	PIRSF:PIRSF000654	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44453	PANTHER:PTHR44453:SF1
SMART:SM00248	SUPFAM:SSF48403	EnsemblPlantsGene:TraesCS4A01G328600	EnsemblPlants:TraesCS4A01G328600.1	TIGR:cd00204	SEG:seg

Description

No Description!

Coordinates

chr4A:-:614106743..614108525

Molecular Weight (calculated)

43722.0 Da

IEP (calculated)

4.239

GRAVY (calculated)

-0.415

Length

418 amino acids

Sequence
(BLAST)

001: MATTQEEQKT SVVEAVEQPS PVAAAAPAEE KTSVKAVEEP SPAAAAPAEE KTSVKAVEEP SPAAAAPAEE KTSVKAEEEP SPAAAAAEGQ RRPPAATAAR
101: RAGAPASPFD FSTMMNLLND PSIKEMAEQI AKDPSFSEMA EQLQKTVAPA PAASASARSP QEVAAALDPQ KYVSTMQQLM QNPQFVAMAE RLGSALMQDP
201: AMSSVLGGLT NPAQKEQLEA RVARMKDDPS LKPILDEIES GGPAAMMKYW NDPEALQKFG RAMGVGPSGA AAGAEAEAEE EEEVVAGEEG EYEEESIIHQ
301: TASVGDVEGL KKALADGVDK DEEDSEGRRG LHFACGYGEL GCAQALLEAG AAADAVDKNK NTALHYAAGY GRKECVALLV DHGASVTLQN LDGKTAIDVA
401: RLNSQEEVLK LLEKHAYV

Best Arabidopsis Sequence Match ( AT2G17390.1 )
(BLAST)

001: MASSSEKTPL IPSDEKNDTK EESKSTTKPE SGSGAPPSPS PTDPGLDFNA FDFSGMAGIL NDPSIKELAE QIAKDPSFNQ LAEQLQRSVP TGSHEGGLPN
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL

Arabidopsis Description

AKR2BAnkyrin repeat domain-containing protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q29Q26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.