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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • endoplasmic reticulum 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g024330.1.1 Tomato nucleus 70.11 89.71
PGSC0003DMT400061066 Potato cytosol 83.62 82.91
VIT_03s0038g04270.t01 Wine grape cytosol 74.14 72.07
KRH62564 Soybean nucleus 71.84 71.43
KRH56373 Soybean cytosol 72.13 71.31
Zm00001d021126_P002 Maize extracellular 63.22 68.11
TraesCS7D01G266800.1 Wheat cytosol 57.18 67.92
EER97033 Sorghum cytosol 62.64 67.49
EES15272 Sorghum cytosol 62.36 64.78
Os09t0513000-01 Rice plasma membrane, plastid 61.21 64.74
TraesCS5A01G296900.1 Wheat plastid 60.92 64.24
TraesCS7B01G164200.1 Wheat cytosol 62.36 64.01
TraesCS5D01G304000.1 Wheat cytosol 60.63 63.94
TraesCS5B01G296200.1 Wheat cytosol 60.63 63.94
GSMUA_Achr8P09410_001 Banana cytosol 62.64 63.93
Zm00001d052700_P001 Maize extracellular 61.49 63.88
GSMUA_AchrUn_... Banana nucleus 61.21 62.83
CDY41654 Canola cytosol, plastid 59.48 61.42
CDX72536 Canola cytosol, plastid 60.63 61.16
AT2G17390.1 Thale cress cytosol 60.34 61.05
CDY49426 Canola cytosol 59.48 60.88
CDY24333 Canola plastid 59.48 60.53
CDY24811 Canola cytosol, plastid 59.77 59.77
Bra010534.1-P Field mustard cytosol, plastid 59.77 59.6
Os03t0851700-01 Rice plasma membrane 59.77 59.43
CDX69141 Canola cytosol, plastid 58.62 58.96
AT4G35450.5 Thale cress cytosol, plastid 58.91 58.57
CDY40634 Canola cytosol, plastid 58.62 58.45
CDX75504 Canola cytosol, plastid 58.05 58.38
Bra011616.1-P Field mustard cytosol, plastid 58.05 58.38
Bra017710.1-P Field mustard cytosol, plastid 58.62 58.29
EER93086 Sorghum cytosol 57.47 56.98
HORVU5Hr1G078120.2 Barley plastid 60.34 56.0
HORVU7Hr1G055860.1 Barley cytosol, mitochondrion 60.92 54.08
TraesCS5D01G545200.1 Wheat cytosol 60.34 52.76
TraesCS5B01G542600.1 Wheat nucleus 58.62 51.91
HORVU5Hr1G122820.3 Barley cytosol 59.48 51.24
TraesCS4A01G328600.1 Wheat cytosol 60.06 50.0
Os08t0539600-01 Rice nucleus 25.0 40.85
PGSC0003DMT400080573 Potato cytosol 13.22 30.26
Os07t0659100-01 Rice cytosol 1.44 23.81
Protein Annotations
Gene3D:1.25.40.20EntrezGene:102589953MapMan:23.1.1.1InterPro:Ankyrin_rptInterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR002110InterPro:IPR020683InterPro:IPR036770
UniProt:M1C8H9PFAM:PF12796EnsemblPlantsGene:PGSC0003DMG400024167PGSC:PGSC0003DMG400024167EnsemblPlants:PGSC0003DMT400062098PIRSF:PIRSF000654
PFscan:PS50088PFscan:PS50297PANTHER:PTHR44453SMART:SM00248SUPFAM:SSF48403UniParc:UPI00029524DA
RefSeq:XP_006341819.1SEG:seg::::
Description
TGB12K interacting protein 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400024167]
Coordinates
chr10:-:27386905..27394202
Molecular Weight (calculated)
37562.8 Da
IEP (calculated)
4.104
GRAVY (calculated)
-0.511
Length
348 amino acids
Sequence
(BLAST)
001: MSQAEKVVLT AKEDEKSGSS ESKKSSESAS MEAQTGETRK TPAAGAGLQN PFDFSAMTGL LNDPSIKELA EQITKDPSFN QMAEQLQKTF QGAAVEDSIP
101: NFDSQQYFST MQQVMQNPQF MTMAEQLGSA LMQDPSMSSI LENLTKSSQK DQLEERMTCI KEDPSLKPIL EEIESGGPAA MMRYWNDQDV LKKLGEAMGF
201: AVAEEGATSA EVSGPDETEK ADEDESVVHQ CASVGDVEGL KNVIASGADK DEEDSEGRTA LHFACGYGEV KCAQVLLESG AEVDALDKNK NTALHYATGY
301: GRKECVALLL ENGAAVTLQN LDGKTPIDVA KLNNQNEVLT LLEKDAFL
Best Arabidopsis Sequence Match ( AT2G17390.1 )
(BLAST)
001: MASSSEKTPL IPSDEKNDTK EESKSTTKPE SGSGAPPSPS PTDPGLDFNA FDFSGMAGIL NDPSIKELAE QIAKDPSFNQ LAEQLQRSVP TGSHEGGLPN
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL
Arabidopsis Description
AKR2BAnkyrin repeat domain-containing protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q29Q26]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.