Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- endoplasmic reticulum 1
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc10g024330.1.1 | Tomato | nucleus | 70.11 | 89.71 |
PGSC0003DMT400061066 | Potato | cytosol | 83.62 | 82.91 |
VIT_03s0038g04270.t01 | Wine grape | cytosol | 74.14 | 72.07 |
KRH62564 | Soybean | nucleus | 71.84 | 71.43 |
KRH56373 | Soybean | cytosol | 72.13 | 71.31 |
Zm00001d021126_P002 | Maize | extracellular | 63.22 | 68.11 |
TraesCS7D01G266800.1 | Wheat | cytosol | 57.18 | 67.92 |
EER97033 | Sorghum | cytosol | 62.64 | 67.49 |
EES15272 | Sorghum | cytosol | 62.36 | 64.78 |
Os09t0513000-01 | Rice | plasma membrane, plastid | 61.21 | 64.74 |
TraesCS5A01G296900.1 | Wheat | plastid | 60.92 | 64.24 |
TraesCS7B01G164200.1 | Wheat | cytosol | 62.36 | 64.01 |
TraesCS5D01G304000.1 | Wheat | cytosol | 60.63 | 63.94 |
TraesCS5B01G296200.1 | Wheat | cytosol | 60.63 | 63.94 |
GSMUA_Achr8P09410_001 | Banana | cytosol | 62.64 | 63.93 |
Zm00001d052700_P001 | Maize | extracellular | 61.49 | 63.88 |
GSMUA_AchrUn_... | Banana | nucleus | 61.21 | 62.83 |
CDY41654 | Canola | cytosol, plastid | 59.48 | 61.42 |
CDX72536 | Canola | cytosol, plastid | 60.63 | 61.16 |
AT2G17390.1 | Thale cress | cytosol | 60.34 | 61.05 |
CDY49426 | Canola | cytosol | 59.48 | 60.88 |
CDY24333 | Canola | plastid | 59.48 | 60.53 |
CDY24811 | Canola | cytosol, plastid | 59.77 | 59.77 |
Bra010534.1-P | Field mustard | cytosol, plastid | 59.77 | 59.6 |
Os03t0851700-01 | Rice | plasma membrane | 59.77 | 59.43 |
CDX69141 | Canola | cytosol, plastid | 58.62 | 58.96 |
AT4G35450.5 | Thale cress | cytosol, plastid | 58.91 | 58.57 |
CDY40634 | Canola | cytosol, plastid | 58.62 | 58.45 |
CDX75504 | Canola | cytosol, plastid | 58.05 | 58.38 |
Bra011616.1-P | Field mustard | cytosol, plastid | 58.05 | 58.38 |
Bra017710.1-P | Field mustard | cytosol, plastid | 58.62 | 58.29 |
EER93086 | Sorghum | cytosol | 57.47 | 56.98 |
HORVU5Hr1G078120.2 | Barley | plastid | 60.34 | 56.0 |
HORVU7Hr1G055860.1 | Barley | cytosol, mitochondrion | 60.92 | 54.08 |
TraesCS5D01G545200.1 | Wheat | cytosol | 60.34 | 52.76 |
TraesCS5B01G542600.1 | Wheat | nucleus | 58.62 | 51.91 |
HORVU5Hr1G122820.3 | Barley | cytosol | 59.48 | 51.24 |
TraesCS4A01G328600.1 | Wheat | cytosol | 60.06 | 50.0 |
Os08t0539600-01 | Rice | nucleus | 25.0 | 40.85 |
PGSC0003DMT400080573 | Potato | cytosol | 13.22 | 30.26 |
Os07t0659100-01 | Rice | cytosol | 1.44 | 23.81 |
Protein Annotations
Gene3D:1.25.40.20 | EntrezGene:102589953 | MapMan:23.1.1.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 |
UniProt:M1C8H9 | PFAM:PF12796 | EnsemblPlantsGene:PGSC0003DMG400024167 | PGSC:PGSC0003DMG400024167 | EnsemblPlants:PGSC0003DMT400062098 | PIRSF:PIRSF000654 |
PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR44453 | SMART:SM00248 | SUPFAM:SSF48403 | UniParc:UPI00029524DA |
RefSeq:XP_006341819.1 | SEG:seg | : | : | : | : |
Description
TGB12K interacting protein 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400024167]
Coordinates
chr10:-:27386905..27394202
Molecular Weight (calculated)
37562.8 Da
IEP (calculated)
4.104
GRAVY (calculated)
-0.511
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQAEKVVLT AKEDEKSGSS ESKKSSESAS MEAQTGETRK TPAAGAGLQN PFDFSAMTGL LNDPSIKELA EQITKDPSFN QMAEQLQKTF QGAAVEDSIP
101: NFDSQQYFST MQQVMQNPQF MTMAEQLGSA LMQDPSMSSI LENLTKSSQK DQLEERMTCI KEDPSLKPIL EEIESGGPAA MMRYWNDQDV LKKLGEAMGF
201: AVAEEGATSA EVSGPDETEK ADEDESVVHQ CASVGDVEGL KNVIASGADK DEEDSEGRTA LHFACGYGEV KCAQVLLESG AEVDALDKNK NTALHYATGY
301: GRKECVALLL ENGAAVTLQN LDGKTPIDVA KLNNQNEVLT LLEKDAFL
101: NFDSQQYFST MQQVMQNPQF MTMAEQLGSA LMQDPSMSSI LENLTKSSQK DQLEERMTCI KEDPSLKPIL EEIESGGPAA MMRYWNDQDV LKKLGEAMGF
201: AVAEEGATSA EVSGPDETEK ADEDESVVHQ CASVGDVEGL KNVIASGADK DEEDSEGRTA LHFACGYGEV KCAQVLLESG AEVDALDKNK NTALHYATGY
301: GRKECVALLL ENGAAVTLQN LDGKTPIDVA KLNNQNEVLT LLEKDAFL
001: MASSSEKTPL IPSDEKNDTK EESKSTTKPE SGSGAPPSPS PTDPGLDFNA FDFSGMAGIL NDPSIKELAE QIAKDPSFNQ LAEQLQRSVP TGSHEGGLPN
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL
Arabidopsis Description
AKR2BAnkyrin repeat domain-containing protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q29Q26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.