Factsheet for HORVU5Hr1G078120.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G296900.1	Wheat	plastid	77.87	88.48
TraesCS5D01G304000.1	Wheat	cytosol	77.6	88.18
TraesCS5B01G296200.1	Wheat	cytosol	77.33	87.88
Zm00001d021126_P002	Maize	extracellular	70.13	81.42
EER97033	Sorghum	cytosol	69.87	81.11
Os09t0513000-01	Rice	plasma membrane, plastid	68.27	77.81
PGSC0003DMT400061066	Potato	cytosol	58.93	62.96
VIT_03s0038g04270.t01	Wine grape	cytosol	59.2	62.01
KRH62564	Soybean	nucleus	57.6	61.71
HORVU7Hr1G055860.1	Barley	cytosol, mitochondrion	64.0	61.22
KRH56373	Soybean	cytosol	57.07	60.8
PGSC0003DMT400062098	Potato	cytosol	56.0	60.34
CDY41654	Canola	cytosol, plastid	53.87	59.94
AT4G35450.5	Thale cress	cytosol, plastid	54.4	58.29
CDX69141	Canola	cytosol, plastid	53.6	58.09
CDX75504	Canola	cytosol, plastid	53.33	57.8
Bra011616.1-P	Field mustard	cytosol, plastid	53.33	57.8
CDX72536	Canola	cytosol, plastid	53.07	57.68
CDY40634	Canola	cytosol, plastid	53.07	57.02
Bra017710.1-P	Field mustard	cytosol, plastid	53.07	56.86
AT2G17390.1	Thale cress	cytosol	52.0	56.69
CDY24811	Canola	cytosol, plastid	52.53	56.61
CDY49426	Canola	cytosol	50.67	55.88
Bra010534.1-P	Field mustard	cytosol, plastid	52.0	55.87
CDY24333	Canola	plastid	50.93	55.85
HORVU5Hr1G122820.3	Barley	cytosol	54.67	50.74
HORVU2Hr1G022900.2	Barley	cytosol	11.2	28.19

Protein Annotations

Gene3D:1.25.40.20	MapMan:23.1.1.1	UniProt:A0A287RWM4	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G078120	EnsemblPlants:HORVU5Hr1G078120.2	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796	PIRSF:PIRSF000654	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR44453	PANTHER:PTHR44453:SF2	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI000B462A18	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:554471018..554476864

Molecular Weight (calculated)

40159.4 Da

IEP (calculated)

4.254

GRAVY (calculated)

-0.369

Length

375 amino acids

Sequence
(BLAST)

001: NLPSFSLSAP PLTIKGFPPL IAFAASPLHH CCLPFLASLS PSASPPPPPP VRSAMASDQN EGSKSEGLAA GAGLPSPFDF SNMSSLLNDP SIREMAEQIA
101: SDPVFNQMAE QLQKSAQGTG EQGVPSSDPQ AYLETMTKVM QNPQFMSMAE RLGNSLMQDP AMSSMLENLT SPAHKEQLEE RMTRIKDDPS LKPILDEIER
201: GGPSAMVKYW NDPEILQKIG EAMSLNFPVD AATSTVLSGP QETDEEGEDD DESIVHNTAS VGDAEGLKKA LDGGANKDEE DVEGRRALHF ACGYGELKCA
301: EILLEAGAAV DALDKNKNTP LHYAAGYGRK ECVDLLLKHG AAVTLQNLDG KTPIEVAKLN SQDEVVKLLE QDVFL

Best Arabidopsis Sequence Match ( AT4G35450.1 )
(BLAST)

001: MASNSEKNPL LSDEKPKSTE ENKSSKPESA SGSSTSSAMP GLNFNAFDFS NMASILNDPS IREMAEQIAK DPAFNQLAEQ LQRSIPNAGQ EGGFPNFDPQ
101: QYVNTMQQVM HNPEFKTMAE KLGTALVQDP QMSPFLDAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW NDPEVLKKLG EAMGMPVAGL
201: PDQTVSAEPE VAEEGEEEES IVHQTASLGD VEGLKAALAS GGNKDEEDSE GRTALHFACG YGELKCAQVL IDAGASVNAV DKNKNTPLHY AAGYGRKECV
301: SLLLENGAAV TLQNLDEKTP IDVAKLNSQL EVVKLLEKDA FL

Arabidopsis Description

AKR2Ankyrin repeat-containing protein 2 [Source:UniProtKB/TrEMBL;Acc:F4JN13]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.