CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24811	Canola	cytosol, plastid	92.17	91.38
CDX69141	Canola	cytosol, plastid	89.86	89.6
CDX75504	Canola	cytosol, plastid	89.57	89.31
AT4G35450.5	Thale cress	cytosol, plastid	86.09	84.86
CDY41654	Canola	cytosol, plastid	82.61	84.57
Bra017710.1-P	Field mustard	cytosol, plastid	84.35	83.14
CDY40634	Canola	cytosol, plastid	84.06	83.09
CDY49426	Canola	cytosol	73.04	74.12
CDY24333	Canola	plastid	73.33	73.98
Zm00001d021126_P002	Maize	extracellular	60.0	64.09
Solyc01g104170.2.1	Tomato	plastid	64.64	63.9
TraesCS7D01G266800.1	Wheat	cytosol	54.2	63.82
EER97033	Sorghum	cytosol	59.71	63.78
PGSC0003DMT400061066	Potato	cytosol	64.64	63.53
VIT_03s0038g04270.t01	Wine grape	cytosol	65.8	63.41
EES15272	Sorghum	cytosol	61.16	62.99
Zm00001d052700_P001	Maize	extracellular	60.58	62.39
KRH62564	Soybean	nucleus	63.19	62.29
KRH56373	Soybean	cytosol	62.9	61.65
GSMUA_Achr8P09410_001	Banana	cytosol	60.0	60.7
PGSC0003DMT400062098	Potato	cytosol	61.16	60.63
TraesCS5D01G304000.1	Wheat	cytosol	57.97	60.61
TraesCS5B01G296200.1	Wheat	cytosol	57.97	60.61
TraesCS5A01G296900.1	Wheat	plastid	57.97	60.61
TraesCS7B01G164200.1	Wheat	cytosol	59.42	60.47
GSMUA_AchrUn_...	Banana	nucleus	58.84	59.88
Os09t0513000-01	Rice	plasma membrane, plastid	56.81	59.57
Os03t0851700-01	Rice	plasma membrane	59.71	58.86
EER93086	Sorghum	cytosol	56.81	55.84
HORVU5Hr1G078120.2	Barley	plastid	57.68	53.07
Solyc10g024330.1.1	Tomato	nucleus	40.29	51.1
HORVU7Hr1G055860.1	Barley	cytosol, mitochondrion	57.97	51.02
TraesCS5B01G542600.1	Wheat	nucleus	55.94	49.11
TraesCS5D01G545200.1	Wheat	cytosol	55.36	47.99
HORVU5Hr1G122820.3	Barley	cytosol	55.65	47.52
TraesCS4A01G328600.1	Wheat	cytosol	56.81	46.89
Os08t0539600-01	Rice	nucleus	25.22	40.85
CDX68340	Canola	nucleus	15.07	29.38
CDX69689	Canola	cytosol	11.59	27.78
CDY23498	Canola	cytosol, mitochondrion, nucleus	18.26	27.39
CDX97184	Canola	cytosol	11.59	24.84
Os07t0659100-01	Rice	cytosol	1.45	23.81

Protein Annotations

Gene3D:1.10.260.100	Gene3D:1.25.40.20	MapMan:23.1.1.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
EnsemblPlants:CDX72536	ProteinID:CDX72536	ProteinID:CDX72536.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00100073001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF13637	PIRSF:PIRSF000654
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44453	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0004EE8064
SEG:seg	:	:	:	:	:

Description

BnaC07g45580D

Coordinates

chrLK031796:+:1757377..1759498

Molecular Weight (calculated)

37032.1 Da

IEP (calculated)

4.159

GRAVY (calculated)

-0.558

Length

345 amino acids

Sequence
(BLAST)

001: MASNPDKNLS PSDEKTGSTE SPKPESTASG SSPSSAALNF NAFDFSNMAG ILNDPSIREL AEQIAKDPAF NQLAEQLQRS IPNAAQGGAG EGSFPNIDPQ
101: QYVSTMQQVM HNPEFQTMAE RLGKALVQDP QMSPFLEAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW NDKDVLKKLG EAMGMPVAGL
201: PGQTASAEPE VAAEEGEEEE EESVVHQTAS LGDVEGLKNA LESGGNKDEE DSEGRTALHF ACGYGELKCA QVLIDAGASV NAVDKNKNTP LHYAAGYGRK
301: ECVSLLLENG AAVTLQNQDE KTPIDVAKLN NQVEVVKLLE KDAFL

Best Arabidopsis Sequence Match ( AT4G35450.1 )
(BLAST)

001: MASNSEKNPL LSDEKPKSTE ENKSSKPESA SGSSTSSAMP GLNFNAFDFS NMASILNDPS IREMAEQIAK DPAFNQLAEQ LQRSIPNAGQ EGGFPNFDPQ
101: QYVNTMQQVM HNPEFKTMAE KLGTALVQDP QMSPFLDAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW NDPEVLKKLG EAMGMPVAGL
201: PDQTVSAEPE VAEEGEEEES IVHQTASLGD VEGLKAALAS GGNKDEEDSE GRTALHFACG YGELKCAQVL IDAGASVNAV DKNKNTPLHY AAGYGRKECV
301: SLLLENGAAV TLQNLDEKTP IDVAKLNSQL EVVKLLEKDA FL

Arabidopsis Description

AKR2Ankyrin repeat-containing protein 2 [Source:UniProtKB/TrEMBL;Acc:F4JN13]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.