CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62564	Soybean	nucleus	94.89	95.43
VIT_03s0038g04270.t01	Wine grape	cytosol	78.98	77.65
Solyc01g104170.2.1	Tomato	plastid	72.44	73.07
PGSC0003DMT400061066	Potato	cytosol	72.73	72.93
EER97033	Sorghum	cytosol	66.19	72.14
PGSC0003DMT400062098	Potato	cytosol	71.31	72.13
Zm00001d021126_P002	Maize	extracellular	65.91	71.83
TraesCS7D01G266800.1	Wheat	cytosol	59.66	71.67
EES15272	Sorghum	cytosol	66.48	69.85
Zm00001d052700_P001	Maize	extracellular	65.91	69.25
Os09t0513000-01	Rice	plasma membrane, plastid	63.35	67.78
GSMUA_AchrUn_...	Banana	nucleus	65.06	67.55
TraesCS7B01G164200.1	Wheat	cytosol	64.77	67.26
GSMUA_Achr8P09410_001	Banana	cytosol	65.06	67.16
TraesCS5D01G304000.1	Wheat	cytosol	61.93	66.06
TraesCS5B01G296200.1	Wheat	cytosol	61.93	66.06
TraesCS5A01G296900.1	Wheat	plastid	61.93	66.06
CDY41654	Canola	cytosol, plastid	62.22	64.99
Os03t0851700-01	Rice	plasma membrane	63.64	64.0
CDY24811	Canola	cytosol, plastid	62.5	63.22
CDX72536	Canola	cytosol, plastid	61.65	62.9
CDY40634	Canola	cytosol, plastid	62.22	62.75
Bra010534.1-P	Field mustard	cytosol, plastid	62.22	62.75
Bra017710.1-P	Field mustard	cytosol, plastid	62.22	62.57
AT2G17390.1	Thale cress	cytosol	61.08	62.5
Solyc10g024330.1.1	Tomato	nucleus	48.01	62.13
EER93086	Sorghum	cytosol	61.65	61.82
CDY49426	Canola	cytosol	59.66	61.76
CDY24333	Canola	plastid	59.94	61.7
CDX69141	Canola	cytosol, plastid	60.23	61.27
CDX75504	Canola	cytosol, plastid	59.94	60.98
Bra011616.1-P	Field mustard	cytosol, plastid	59.94	60.98
AT4G35450.5	Thale cress	cytosol, plastid	60.51	60.86
HORVU5Hr1G078120.2	Barley	plastid	60.8	57.07
HORVU7Hr1G055860.1	Barley	cytosol, mitochondrion	63.35	56.89
TraesCS5D01G545200.1	Wheat	cytosol	60.51	53.52
HORVU5Hr1G122820.3	Barley	cytosol	61.08	53.22
TraesCS5B01G542600.1	Wheat	nucleus	59.09	52.93
TraesCS4A01G328600.1	Wheat	cytosol	59.66	50.24
Os08t0539600-01	Rice	nucleus	24.72	40.85
KRH43442	Soybean	cytosol	12.5	28.03
Os07t0659100-01	Rice	cytosol	1.42	23.81

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100784610	MapMan:23.1.1.1	EMBL:ACUP02004114	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EMBL:BT098506	UniProt:C6TLC2	EnsemblPlantsGene:GLYMA_06G320200	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009536	GO:GO:0016020	GO:GO:0030941	GO:GO:0031359	GO:GO:0045036
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	ProteinID:KRH56372.1	EnsemblPlants:KRH56373	ProteinID:KRH56373
ProteinID:KRH56373.1	ProteinID:KRH56374.1	PFAM:PF12796	PIRSF:PIRSF000654	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR44453	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI0001B16600	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:50893263..50898371

Molecular Weight (calculated)

37882.0 Da

IEP (calculated)

4.274

GRAVY (calculated)

-0.645

Length

352 amino acids

Sequence
(BLAST)

001: MASDSKKDFP ADDKAGTEES KTSKDETSSK DSPAEQRATA TFGPRPGPAG HPGNPFDLSA MSGLLNDPSI KELAEQIAKD PSFNQMAEQL QKTFQGAPQD
101: AIPSFDNQQY FSTMQQVMQN PNFMTMAERL GNALMQDPSM SAMLESFSNP SNKDQLEERM ARIKEDPSLK HILEEIETGG PAAMMRYWNN EEVLQKLGQA
201: MGLANSGDAG ASAENSGADE TEDLGNEDES IVHHTASVGD VEGLKNALAS GADKDEEDSE GRTALHFACG YGEVKCAQVL LEAGAKVDAL DKNKNTALHY
301: AAGYGRKECV ALLLENGAAV TLQNMDGKTP IDVAKLNNQN EVLKLLEKDA FL

Best Arabidopsis Sequence Match ( AT2G17390.1 )
(BLAST)

001: MASSSEKTPL IPSDEKNDTK EESKSTTKPE SGSGAPPSPS PTDPGLDFNA FDFSGMAGIL NDPSIKELAE QIAKDPSFNQ LAEQLQRSVP TGSHEGGLPN
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL

Arabidopsis Description

AKR2BAnkyrin repeat domain-containing protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q29Q26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.