Factsheet for TraesCS5A01G296900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plastid: 16595579

msms PMID: 16595579 doi

Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G304000.1	Wheat	cytosol	98.48	98.48
TraesCS5B01G296200.1	Wheat	cytosol	98.18	98.18
Zm00001d021126_P002	Maize	extracellular	85.15	87.0
EER97033	Sorghum	cytosol	84.85	86.69
Os09t0513000-01	Rice	plasma membrane, plastid	83.64	83.89
HORVU5Hr1G078120.2	Barley	plastid	88.48	77.87
PGSC0003DMT400061066	Potato	cytosol	68.48	64.39
KRH62564	Soybean	nucleus	66.36	62.57
VIT_03s0038g04270.t01	Wine grape	cytosol	67.88	62.57
KRH56373	Soybean	cytosol	66.06	61.93
PGSC0003DMT400062098	Potato	cytosol	64.24	60.92
CDY41654	Canola	cytosol, plastid	61.52	60.24
AT4G35450.5	Thale cress	cytosol, plastid	62.12	58.57
CDX72536	Canola	cytosol, plastid	60.61	57.97
CDX75504	Canola	cytosol, plastid	60.0	57.23
Bra011616.1-P	Field mustard	cytosol, plastid	60.0	57.23
CDY40634	Canola	cytosol, plastid	60.3	57.02
CDX69141	Canola	cytosol, plastid	59.7	56.94
Bra017710.1-P	Field mustard	cytosol, plastid	60.3	56.86
AT2G17390.1	Thale cress	cytosol	59.09	56.69
CDY24811	Canola	cytosol, plastid	59.7	56.61
CDY49426	Canola	cytosol	57.88	56.18
Bra010534.1-P	Field mustard	cytosol, plastid	59.39	56.16
CDY24333	Canola	plastid	58.18	56.14
TraesCS4A01G328600.1	Wheat	cytosol	62.42	49.28
TraesCS2A01G130700.1	Wheat	cytosol	13.03	28.86

Protein Annotations

EnsemblPlants:TraesCS5A01G296900.1	EnsemblPlantsGene:TraesCS5A01G296900	Gene3D:1.25.40.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
PANTHER:PTHR44453	PANTHER:PTHR44453:SF2	PFAM:PF12796	PFscan:PS50088	PFscan:PS50297	PIRSF:PIRSF000654
SEG:seg	SMART:SM00248	SUPFAM:SSF48403	TIGR:cd00204	MapMan:23.1.1.1	:

Description

No Description!

Coordinates

chr5A:+:504869867..504873183

Molecular Weight (calculated)

35701.9 Da

IEP (calculated)

4.187

GRAVY (calculated)

-0.549

Length

330 amino acids

Sequence
(BLAST)

001: MASDQNKDSK SEGLSEAKKG ASPTAGAGLP SPFDFSNMSS LLNDPSIREM AEQIASDPVF NQMAEQLQKS AQGTGEQGVP NLDPQAYMET MTQVMQNPQF
101: MSMAERLGNT LMQDPAMSSM LENLTSPAHK EQLEERMSRI KDDPSLKPIL DEIERGGPSA MVKYWNDPEI LQKIGQAMSL NFPVDAATST VLSGPQETDE
201: EGEDDDESIV HNTASVGDAE GLKKALDGGA NKDEEDVEGR RALHFACGYG ELKCAEILLE AGAAVDALDK NKNTPLHYAA GYGRKECVDL LLKHGAAVTL
301: QNLDGKTPIE VAKLNNQDEV VKLLEQDVFL

Best Arabidopsis Sequence Match ( AT4G35450.1 )
(BLAST)

001: MASNSEKNPL LSDEKPKSTE ENKSSKPESA SGSSTSSAMP GLNFNAFDFS NMASILNDPS IREMAEQIAK DPAFNQLAEQ LQRSIPNAGQ EGGFPNFDPQ
101: QYVNTMQQVM HNPEFKTMAE KLGTALVQDP QMSPFLDAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW NDPEVLKKLG EAMGMPVAGL
201: PDQTVSAEPE VAEEGEEEES IVHQTASLGD VEGLKAALAS GGNKDEEDSE GRTALHFACG YGELKCAQVL IDAGASVNAV DKNKNTPLHY AAGYGRKECV
301: SLLLENGAAV TLQNLDEKTP IDVAKLNSQL EVVKLLEKDA FL

Arabidopsis Description

AKR2Ankyrin repeat-containing protein 2 [Source:UniProtKB/TrEMBL;Acc:F4JN13]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.