CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40634	Canola	cytosol, plastid	87.83	84.81
CDY24811	Canola	cytosol, plastid	86.94	84.2
CDX72536	Canola	cytosol, plastid	84.57	82.61
CDX69141	Canola	cytosol, plastid	84.57	82.37
CDX75504	Canola	cytosol, plastid	84.57	82.37
AT4G35450.5	Thale cress	cytosol, plastid	80.71	77.71
CDY24333	Canola	plastid	72.7	71.64
CDY49426	Canola	cytosol	72.11	71.47
TraesCS7D01G266800.1	Wheat	cytosol	57.27	65.87
Zm00001d021126_P002	Maize	extracellular	61.42	64.09
EER97033	Sorghum	cytosol	61.42	64.09
EES15272	Sorghum	cytosol	63.5	63.88
Zm00001d052700_P001	Maize	extracellular	63.2	63.58
VIT_03s0038g04270.t01	Wine grape	cytosol	66.77	62.85
KRH62564	Soybean	nucleus	64.99	62.57
KRH56373	Soybean	cytosol	64.99	62.22
Solyc01g104170.2.1	Tomato	plastid	64.09	61.89
PGSC0003DMT400061066	Potato	cytosol	64.09	61.54
TraesCS5D01G304000.1	Wheat	cytosol	60.24	61.52
TraesCS5B01G296200.1	Wheat	cytosol	60.24	61.52
TraesCS5A01G296900.1	Wheat	plastid	60.24	61.52
Os09t0513000-01	Rice	plasma membrane, plastid	59.35	60.79
TraesCS7B01G164200.1	Wheat	cytosol	60.53	60.18
GSMUA_AchrUn_...	Banana	nucleus	59.94	59.59
PGSC0003DMT400062098	Potato	cytosol	61.42	59.48
GSMUA_Achr8P09410_001	Banana	cytosol	59.64	58.94
Os03t0851700-01	Rice	plasma membrane	60.24	58.0
EER93086	Sorghum	cytosol	59.05	56.7
HORVU5Hr1G078120.2	Barley	plastid	59.94	53.87
HORVU7Hr1G055860.1	Barley	cytosol, mitochondrion	59.05	50.77
Solyc10g024330.1.1	Tomato	nucleus	40.06	49.63
TraesCS5D01G545200.1	Wheat	cytosol	58.16	49.25
TraesCS5B01G542600.1	Wheat	nucleus	56.38	48.35
HORVU5Hr1G122820.3	Barley	cytosol	56.38	47.03
TraesCS4A01G328600.1	Wheat	cytosol	56.97	45.93
Os08t0539600-01	Rice	nucleus	27.0	42.72
CDX69689	Canola	cytosol	12.17	28.47
CDX68340	Canola	nucleus	14.84	28.25
CDY23498	Canola	cytosol, mitochondrion, nucleus	17.51	25.65
CDX97184	Canola	cytosol	12.17	25.47
Os07t0659100-01	Rice	cytosol	1.48	23.81

Protein Annotations

Gene3D:1.10.260.100	Gene3D:1.25.40.20	MapMan:23.1.1.1	UniProt:A0A078HW79	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY41654	ProteinID:CDY41654	ProteinID:CDY41654.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00073321001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF13637
PIRSF:PIRSF000654	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44453	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI0004EDE5AD	SEG:seg	:	:	:	:

Description

BnaC03g62300DBnaC03g62300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HW79]

Coordinates

chrLK032502:-:206687..208908

Molecular Weight (calculated)

36156.4 Da

IEP (calculated)

4.317

GRAVY (calculated)

-0.501

Length

337 amino acids

Sequence
(BLAST)

001: MASNPDKNLS PSDDKPESTA SGSSPSSANP PAMNLNAFDF SNMAGILNDP SIRELAEQIA KDPAFNQLAE QLQRSIPNAA QGGGAAGGFP NIDPQQYVST
101: MQQVMHNPEF QTMAERLGKA LVQDPQMSPF LEAFSNPETA EHLTERMARM KEDPELKPIL DEIDAGGPSA MMKYWNDKDV LKKLGEAMGM PIAGLPHQAA
201: SAAPEVAEEE EEEESIVHHT ASRGDVEGLK NALASGGNKD EEDSEGRTAL HFACGYGELK CAQVLIDAGA SVNAVDKNKN TPLHYAAGYG RKECVSLLLE
301: NGAAVTLQNL DEKTPIDVAK LNNQLEVVKL LEKDAFL

Best Arabidopsis Sequence Match ( AT4G35450.4 )
(BLAST)

001: MPGLNFNAFD FSNMASILND PSIREMAEQI AKDPAFNQLA EQLQRSIPNA GQEGGFPNFD PQQYVNTMQQ VMHNPEFKTM AEKLGTALVQ DPQMSPFLDA
101: FSNPETAEHF TERMARMKED PELKPILDEI DAGGPSAMMK YWNDPEVLKK LGEAMGMPVA GLPDQTVSAE PEVAEEGEEE ESIVHQTASL GDVEGLKAAL
201: ASGGNKDEED SEGRTALHFA CGYGELKCAQ VLIDAGASVN AVDKNKNTPL HYAAGYGRKE CVSLLLENGA AVTLQNLDEK TPIDVAKLNS QLEVVKLLEK
301: DAFL

Arabidopsis Description

AKR2Ankyrin repeat-containing protein 2 [Source:UniProtKB/TrEMBL;Acc:F4JN13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.