Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003952.1-P | Field mustard | nucleus | 57.39 | 75.0 |
| CDX68340 | Canola | nucleus | 50.87 | 66.1 |
| CDY24333 | Canola | plastid | 27.83 | 18.71 |
| CDY49426 | Canola | cytosol | 27.39 | 18.53 |
| CDX72536 | Canola | cytosol, plastid | 27.39 | 18.26 |
| CDX75504 | Canola | cytosol, plastid | 26.52 | 17.63 |
| CDY41654 | Canola | cytosol, plastid | 25.65 | 17.51 |
| CDX69141 | Canola | cytosol, plastid | 26.09 | 17.34 |
| CDY24811 | Canola | cytosol, plastid | 26.09 | 17.24 |
| CDY40634 | Canola | cytosol, plastid | 26.09 | 17.19 |
| CDX97184 | Canola | cytosol | 7.39 | 10.56 |
| CDX69689 | Canola | cytosol | 6.09 | 9.72 |
Protein Annotations
| EnsemblPlants:CDY23498 | EnsemblPlantsGene:GSBRNA2T00022132001 | PANTHER:PTHR44453 | ProteinID:CDY23498 | ProteinID:CDY23498.1 | UniParc:UPI0004EE4840 |
| UniProt:A0A078GFT4 | MapMan:35.1 | : | : | : | : |
Description
BnaC06g24670DBnaC06g24670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFT4]
Coordinates
chrLK032144:+:196579..197907
Molecular Weight (calculated)
25819.9 Da
IEP (calculated)
8.120
GRAVY (calculated)
-0.707
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGSERTLP CPDSSKITSP ALKFDALDFP AMKAMEDFET CAREHGEKMR EDPAYILELS RCNPAAKFDQ EQLSNMGQMF QRLQDHARQD PRASFENLGK
101: PGALEEFAER VAQIRKDPEV EPILAELDAC PAALLKFVDD KQVLKKLGKS MLRSQGLNYD DDDEELVSEG RKALKIAFGY AKMKCFKVLL DAERKMANKV
201: ERKKKTTSHH ASTSGKTKRS SRLSNKCDAV
101: PGALEEFAER VAQIRKDPEV EPILAELDAC PAALLKFVDD KQVLKKLGKS MLRSQGLNYD DDDEELVSEG RKALKIAFGY AKMKCFKVLL DAERKMANKV
201: ERKKKTTSHH ASTSGKTKRS SRLSNKCDAV
001: MASSSEKTPL IPSDEKNDTK EESKSTTKPE SGSGAPPSPS PTDPGLDFNA FDFSGMAGIL NDPSIKELAE QIAKDPSFNQ LAEQLQRSVP TGSHEGGLPN
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL
Arabidopsis Description
AKR2BAnkyrin repeat domain-containing protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q29Q26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.