Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003952.1-P | Field mustard | nucleus | 90.96 | 91.48 |
| CDY23498 | Canola | cytosol, mitochondrion, nucleus | 66.1 | 50.87 |
| CDY24333 | Canola | plastid | 31.64 | 16.37 |
| CDY49426 | Canola | cytosol | 31.07 | 16.18 |
| CDX72536 | Canola | cytosol, plastid | 29.38 | 15.07 |
| CDY40634 | Canola | cytosol, plastid | 29.38 | 14.9 |
| CDY41654 | Canola | cytosol, plastid | 28.25 | 14.84 |
| CDY24811 | Canola | cytosol, plastid | 28.81 | 14.66 |
| CDX69141 | Canola | cytosol, plastid | 27.68 | 14.16 |
| CDX75504 | Canola | cytosol, plastid | 27.68 | 14.16 |
| CDX97184 | Canola | cytosol | 11.86 | 13.04 |
| CDX69689 | Canola | cytosol | 10.17 | 12.5 |
Protein Annotations
| EnsemblPlants:CDX68340 | EnsemblPlantsGene:GSBRNA2T00099642001 | Gene3D:1.25.40.20 | InterPro:Ankyrin_rpt-contain_sf | InterPro:IPR036770 | PANTHER:PTHR44453 |
| ProteinID:CDX68340 | ProteinID:CDX68340.1 | SEG:seg | SUPFAM:SSF48403 | UniParc:UPI0004EDD239 | MapMan:35.1 |
Description
BnaA07g23800D
Coordinates
chrLK031787:+:5112798..5114300
Molecular Weight (calculated)
19882.7 Da
IEP (calculated)
9.172
GRAVY (calculated)
-0.821
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQMFQRLQD HARQDPRASF ENLGKPGALE EFAERVAQIR KDPEVEPILA ELDACPAALL KFVDDKQVLK KLGKSMLRSQ GLNYDDDDDD ELVSEGRKAL
101: KIAFGYAKMK CFKVLLDAER KKANKVERKK KTTSHHASRK GKTKRSNILS NKGDDVALKN SESQIPTTEL DDSSSMC
101: KIAFGYAKMK CFKVLLDAER KKANKVERKK KTTSHHASRK GKTKRSNILS NKGDDVALKN SESQIPTTEL DDSSSMC
001: MASSSEKTPL IPSDEKNDTK EESKSTTKPE SGSGAPPSPS PTDPGLDFNA FDFSGMAGIL NDPSIKELAE QIAKDPSFNQ LAEQLQRSVP TGSHEGGLPN
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL
Arabidopsis Description
AKR2BAnkyrin repeat domain-containing protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q29Q26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.