CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017710.1-P	Field mustard	cytosol, plastid	99.71	99.43
CDY41654	Canola	cytosol, plastid	84.81	87.83
CDX72536	Canola	cytosol, plastid	83.09	84.06
CDX75504	Canola	cytosol, plastid	81.09	81.79
CDX69141	Canola	cytosol, plastid	80.8	81.5
CDY24811	Canola	cytosol, plastid	81.09	81.32
AT4G35450.5	Thale cress	cytosol, plastid	77.94	77.71
CDY24333	Canola	plastid	71.35	72.81
CDY49426	Canola	cytosol	70.77	72.65
EER97033	Sorghum	cytosol	59.89	64.71
TraesCS7D01G266800.1	Wheat	cytosol	54.15	64.51
Zm00001d021126_P002	Maize	extracellular	59.6	64.4
EES15272	Sorghum	cytosol	60.74	63.28
Zm00001d052700_P001	Maize	extracellular	60.46	62.99
VIT_03s0038g04270.t01	Wine grape	cytosol	63.9	62.29
KRH56373	Soybean	cytosol	62.75	62.22
KRH62564	Soybean	nucleus	62.18	62.0
Solyc01g104170.2.1	Tomato	plastid	61.03	61.03
PGSC0003DMT400061066	Potato	cytosol	61.03	60.68
TraesCS5D01G304000.1	Wheat	cytosol	57.02	60.3
TraesCS5B01G296200.1	Wheat	cytosol	57.02	60.3
TraesCS5A01G296900.1	Wheat	plastid	57.02	60.3
Os09t0513000-01	Rice	plasma membrane, plastid	56.45	59.88
TraesCS7B01G164200.1	Wheat	cytosol	57.88	59.59
GSMUA_AchrUn_...	Banana	nucleus	57.31	59.0
GSMUA_Achr8P09410_001	Banana	cytosol	57.31	58.65
PGSC0003DMT400062098	Potato	cytosol	58.45	58.62
Os03t0851700-01	Rice	plasma membrane	58.45	58.29
EER93086	Sorghum	cytosol	56.45	56.13
HORVU5Hr1G078120.2	Barley	plastid	57.02	53.07
TraesCS5D01G545200.1	Wheat	cytosol	57.59	50.5
HORVU7Hr1G055860.1	Barley	cytosol, mitochondrion	56.45	50.26
TraesCS5B01G542600.1	Wheat	nucleus	55.59	49.36
Solyc10g024330.1.1	Tomato	nucleus	37.82	48.53
HORVU5Hr1G122820.3	Barley	cytosol	55.87	48.27
TraesCS4A01G328600.1	Wheat	cytosol	56.16	46.89
Os08t0539600-01	Rice	nucleus	25.79	42.25
CDX68340	Canola	nucleus	14.9	29.38
CDX69689	Canola	cytosol	11.46	27.78
CDY23498	Canola	cytosol, mitochondrion, nucleus	17.19	26.09
CDX97184	Canola	cytosol	11.46	24.84
Os07t0659100-01	Rice	cytosol	1.43	23.81

Protein Annotations

Gene3D:1.10.260.100	Gene3D:1.25.40.20	MapMan:23.1.1.1	UniProt:A0A078HTI6	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY40634	ProteinID:CDY40634	ProteinID:CDY40634.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00071488001	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF13637
PIRSF:PIRSF000654	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44453	SMART:SM00248	SUPFAM:SSF48403
UniParc:UPI0004EF02A2	SEG:seg	:	:	:	:

Description

BnaA03g53290DBnaA03g53290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTI6]

Coordinates

chrLK032476:-:78376..80522

Molecular Weight (calculated)

37354.4 Da

IEP (calculated)

4.140

GRAVY (calculated)

-0.570

Length

349 amino acids

Sequence
(BLAST)

001: MASSPDKNLS PSDEKTGSTE SPKPESAASG SSPSSANNPP ALNFNAFDFS NMAGILNDPS IRELAEQIAK DPAFNQLAEQ LQRSIPDAAQ GGAGGGFPNI
101: DPQQYVSTMQ QVMHNPEFQT MAERLGKALV QDPQMSPFLE AFSNPETAEH FTERMARMKE DPELKPILDE IDAGGPSAMM KYWNDKDVLK KLGEAMGMPV
201: AGLPGQTASA EPEVAAEEGE EEEEEESIVH QTASLGDVEG LKNALESGGN KDEEDSEGRT ALHFACGYGE LKCAQVLIDA GASVNAVDKN KNTPLHYAAG
301: YGRKECVSLL LENGAAVTLQ NQDEKTPIDV AKLNNQAEVV KLLEKDAFL

Best Arabidopsis Sequence Match ( AT4G35450.1 )
(BLAST)

001: MASNSEKNPL LSDEKPKSTE ENKSSKPESA SGSSTSSAMP GLNFNAFDFS NMASILNDPS IREMAEQIAK DPAFNQLAEQ LQRSIPNAGQ EGGFPNFDPQ
101: QYVNTMQQVM HNPEFKTMAE KLGTALVQDP QMSPFLDAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW NDPEVLKKLG EAMGMPVAGL
201: PDQTVSAEPE VAEEGEEEES IVHQTASLGD VEGLKAALAS GGNKDEEDSE GRTALHFACG YGELKCAQVL IDAGASVNAV DKNKNTPLHY AAGYGRKECV
301: SLLLENGAAV TLQNLDEKTP IDVAKLNSQL EVVKLLEKDA FL

Arabidopsis Description

AKR2Ankyrin repeat-containing protein 2 [Source:UniProtKB/TrEMBL;Acc:F4JN13]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.