Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69689 | Canola | cytosol | 78.88 | 88.19 |
| AT5G12320.1 | Thale cress | cytosol | 69.57 | 77.78 |
| Solyc04g008580.2.1 | Tomato | cytosol | 48.45 | 66.67 |
| VIT_06s0009g03440.t01 | Wine grape | cytosol | 54.04 | 58.0 |
| PGSC0003DMT400080573 | Potato | cytosol | 52.17 | 55.26 |
| KRH43442 | Soybean | cytosol | 51.55 | 52.87 |
| Zm00001d022393_P001 | Maize | cytosol | 49.07 | 51.63 |
| EER99842 | Sorghum | cytosol | 49.07 | 50.97 |
| HORVU2Hr1G022900.2 | Barley | cytosol | 46.58 | 50.34 |
| GSMUA_AchrUn_... | Banana | extracellular | 53.42 | 50.29 |
| TraesCS2D01G132700.1 | Wheat | cytosol | 45.96 | 49.66 |
| TraesCS2A01G130700.1 | Wheat | cytosol | 45.96 | 49.66 |
| TraesCS2B01G152800.1 | Wheat | cytosol | 46.58 | 49.02 |
| CDY41654 | Canola | cytosol, plastid | 25.47 | 12.17 |
| CDX68340 | Canola | nucleus | 13.04 | 11.86 |
| CDY24811 | Canola | cytosol, plastid | 25.47 | 11.78 |
| CDX72536 | Canola | cytosol, plastid | 24.84 | 11.59 |
| CDX75504 | Canola | cytosol, plastid | 24.84 | 11.56 |
| CDX69141 | Canola | cytosol, plastid | 24.84 | 11.56 |
| CDY40634 | Canola | cytosol, plastid | 24.84 | 11.46 |
| CDY49426 | Canola | cytosol | 23.6 | 11.18 |
| CDY24333 | Canola | plastid | 23.6 | 11.11 |
| CDY23498 | Canola | cytosol, mitochondrion, nucleus | 10.56 | 7.39 |
Protein Annotations
| EnsemblPlants:CDX97184 | EnsemblPlantsGene:GSBRNA2T00104180001 | Gene3D:1.25.40.20 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 |
| PANTHER:PTHR45387 | PFAM:PF13637 | PFscan:PS50088 | PFscan:PS50297 | PRINTS:PR01415 | ProteinID:CDX97184 |
| ProteinID:CDX97184.1 | SMART:SM00248 | SUPFAM:SSF48403 | UniParc:UPI0004EC6B9F | MapMan:35.2 | : |
Description
BnaC09g44410D
Coordinates
chrLK031897:+:1063630..1064857
Molecular Weight (calculated)
17488.9 Da
IEP (calculated)
4.416
GRAVY (calculated)
-0.110
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGNPSGLKI RFCPVEKMGA ETVVEAEKID DLLEAARYND IDDLKSLAFD GVSLNSRDSQ GRTALHMAAA NGHMSIVEYL ISQGVDINAL NEENNAPLHW
101: ACLNGHIEVV KKMILAGASL SLLNRYERTP MDEAIGAGKM EIIDAINTTV TQMELENTTV A
101: ACLNGHIEVV KKMILAGASL SLLNRYERTP MDEAIGAGKM EIIDAINTTV TQMELENTTV A
001: MGAETNGVAE KVDDLLEAAR YNDIDDLRTL ASDGLSLHSR DSQGRTALHM AAANGHMTIV EYLISEGVDI NALNDENNAP LHWACLNGHV EVVKRLILAG
101: ASLSLLNRYE RTPMDEAIGA EKMEIIDAIN TTVAQMELEN TSMT
101: ASLSLLNRYE RTPMDEAIGA EKMEIIDAIN TTVAQMELEN TSMT
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GWI1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.