CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g008580.2.1	Tomato	cytosol	47.77	64.1
VIT_06s0009g03440.t01	Wine grape	cytosol	59.87	62.67
TraesCS2A01G130700.1	Wheat	cytosol	54.78	57.72
HORVU2Hr1G022900.2	Barley	cytosol	54.14	57.05
TraesCS2D01G132700.1	Wheat	cytosol	54.14	57.05
Bra008899.1-P	Field mustard	cytosol	52.23	56.94
CDX69689	Canola	cytosol	52.23	56.94
TraesCS2B01G152800.1	Wheat	cytosol	52.87	54.25
PGSC0003DMT400080573	Potato	cytosol	52.23	53.95
AT5G12320.1	Thale cress	cytosol	49.04	53.47
CDX97184	Canola	cytosol	52.87	51.55
Zm00001d022393_P001	Maize	cytosol	49.04	50.33
EER99842	Sorghum	cytosol	49.68	50.32
GSMUA_AchrUn_...	Banana	extracellular	50.96	46.78
KRH56373	Soybean	cytosol	28.03	12.5
KRH62564	Soybean	nucleus	27.39	12.29

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100306615	MapMan:35.2	EMBL:ACUP02004861	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	EMBL:BT090816	UniProt:C6T063	EnsemblPlantsGene:GLYMA_08G150200	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	EnsemblPlants:KRH43442	ProteinID:KRH43442	ProteinID:KRH43442.1	ProteinID:KRH43443.1	ProteinID:KRH43445.1
PFAM:PF13857	PRINTS:PR01415	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR45387	SMART:SM00248
SUPFAM:SSF48403	UniParc:UPI0001B152ED	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:11541466..11546066

Molecular Weight (calculated)

16840.8 Da

IEP (calculated)

4.262

GRAVY (calculated)

-0.292

Length

157 amino acids

Sequence
(BLAST)

001: MGATEANTTL QARPETTSEN IEALLDAARY DDMDDVKSLE ASGVPLDSKD EQGRTALHMA AANGHIDIVE YLISRGVDLN SPNEEKNTPL HWACLNGHVE
101: AVKKLIMAGA NVSVLNSHER TPMDEAVSGG KPEVMDAINE AVALVELRGA MVFAQET

Best Arabidopsis Sequence Match ( AT5G12320.1 )
(BLAST)

001: MGAETNGVAE KVDDLLEAAR YNDIDDLRTL ASDGLSLHSR DSQGRTALHM AAANGHMTIV EYLISEGVDI NALNDENNAP LHWACLNGHV EVVKRLILAG
101: ASLSLLNRYE RTPMDEAIGA EKMEIIDAIN TTVAQMELEN TSMT

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GWI1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.