Factsheet for VIT_06s0009g03440.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g008580.2.1	Tomato	cytosol	61.33	78.63
PGSC0003DMT400080573	Potato	cytosol	66.0	65.13
HORVU2Hr1G022900.2	Barley	cytosol	64.67	65.1
EER99842	Sorghum	cytosol	66.67	64.52
Zm00001d022393_P001	Maize	cytosol	64.67	63.4
TraesCS2D01G132700.1	Wheat	cytosol	62.67	63.09
TraesCS2A01G130700.1	Wheat	cytosol	62.0	62.42
TraesCS2B01G152800.1	Wheat	cytosol	62.0	60.78
KRH43442	Soybean	cytosol	62.67	59.87
Bra008899.1-P	Field mustard	cytosol	56.67	59.03
CDX69689	Canola	cytosol	56.67	59.03
AT5G12320.1	Thale cress	cytosol	55.33	57.64
CDX97184	Canola	cytosol	58.0	54.04
GSMUA_AchrUn_...	Banana	extracellular	61.33	53.8
VIT_03s0038g04270.t01	Wine grape	cytosol	28.0	11.73

Protein Annotations

Gene3D:1.25.40.20	Gene3D:1.25.40.960	EntrezGene:100265466	wikigene:100265466	MapMan:35.2	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:CBI24238	ProteinID:CBI24238.3	UniProt:D7T159	EMBL:FN595504
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	EntrezGene:LOC100265466	wikigene:LOC100265466	PFAM:PF13637
PRINTS:PR01415	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR45387	SMART:SM00248	SUPFAM:SSF48403
TIGR:TC67183	UniParc:UPI00015C92C8	ArrayExpress:VIT_06s0009g03440	EnsemblPlantsGene:VIT_06s0009g03440	EnsemblPlants:VIT_06s0009g03440.t01	unigene:Vvi.3544
RefSeq:XP_002280089	RefSeq:XP_002280089.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:+:16691127..16701641

Molecular Weight (calculated)

15749.4 Da

IEP (calculated)

4.171

GRAVY (calculated)

-0.023

Length

150 amino acids

Sequence
(BLAST)

001: MPSEEASAET ASQENVEALL EAARYDDIDD VKIIASAGVS LDSKDSQGRT ALHMAAANGH LDVVEFLISS GVDLNASNVE KNTPLHWACL NGHIEVVKNL
101: ILAGANVTAL NSHERTPMDE AVSRGKMDVI DAINAAVAQV ELTGIGVSET

Best Arabidopsis Sequence Match ( AT5G12320.1 )
(BLAST)

001: MGAETNGVAE KVDDLLEAAR YNDIDDLRTL ASDGLSLHSR DSQGRTALHM AAANGHMTIV EYLISEGVDI NALNDENNAP LHWACLNGHV EVVKRLILAG
101: ASLSLLNRYE RTPMDEAIGA EKMEIIDAIN TTVAQMELEN TSMT

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GWI1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.