CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022393_P001	Maize	cytosol	87.74	88.89
HORVU2Hr1G022900.2	Barley	cytosol	75.48	78.52
TraesCS2D01G132700.1	Wheat	cytosol	73.55	76.51
TraesCS2A01G130700.1	Wheat	cytosol	72.9	75.84
Solyc04g008580.2.1	Tomato	cytosol	56.13	74.36
TraesCS2B01G152800.1	Wheat	cytosol	72.26	73.2
VIT_06s0009g03440.t01	Wine grape	cytosol	64.52	66.67
PGSC0003DMT400080573	Potato	cytosol	63.23	64.47
GSMUA_AchrUn_...	Banana	extracellular	62.58	56.73
CDX69689	Canola	cytosol	50.97	54.86
Bra008899.1-P	Field mustard	cytosol	50.97	54.86
AT5G12320.1	Thale cress	cytosol	49.03	52.78
KRH43442	Soybean	cytosol	50.32	49.68
CDX97184	Canola	cytosol	50.97	49.07
EER97033	Sorghum	cytosol	27.74	13.31
EES15272	Sorghum	cytosol	27.74	12.84
EER93086	Sorghum	cytosol	28.39	12.54

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	EntrezGene:8072248	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
UniProt:C5X472	EnsemblPlants:EER99842	ProteinID:EER99842	ProteinID:EER99842.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	PFAM:PF13637	PRINTS:PR01415	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR45387
SMART:SM00248	EnsemblPlantsGene:SORBI_3002G403200	SUPFAM:SSF48403	UniParc:UPI0001A83F21	RefSeq:XP_002463321.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:75351104..75353319

Molecular Weight (calculated)

15966.7 Da

IEP (calculated)

4.185

GRAVY (calculated)

0.047

Length

155 amino acids

Sequence
(BLAST)

001: MGVEPAQPNP TAAAVTATTA EQAQDLIDAA RYDDLEDVVA MFSAGISLDS TDSQGRTALH MASANGHLAV VEYLIQNGAN VNATNLEKNT PLHWACLNGH
101: IEVIKALISA GASVSALNSH EKTPMDEAVS KGKMDVIDAI GAAVAQAELD GVTVS

Best Arabidopsis Sequence Match ( AT5G12320.1 )
(BLAST)

001: MGAETNGVAE KVDDLLEAAR YNDIDDLRTL ASDGLSLHSR DSQGRTALHM AAANGHMTIV EYLISEGVDI NALNDENNAP LHWACLNGHV EVVKRLILAG
101: ASLSLLNRYE RTPMDEAIGA EKMEIIDAIN TTVAQMELEN TSMT

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GWI1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.