Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008899.1-P | Field mustard | cytosol | 86.11 | 86.11 |
| CDX69689 | Canola | cytosol | 86.11 | 86.11 |
| CDX97184 | Canola | cytosol | 77.78 | 69.57 |
| Solyc04g008580.2.1 | Tomato | cytosol | 52.08 | 64.1 |
| VIT_06s0009g03440.t01 | Wine grape | cytosol | 57.64 | 55.33 |
| PGSC0003DMT400080573 | Potato | cytosol | 58.33 | 55.26 |
| GSMUA_AchrUn_... | Banana | extracellular | 58.33 | 49.12 |
| KRH43442 | Soybean | cytosol | 53.47 | 49.04 |
| EER99842 | Sorghum | cytosol | 52.78 | 49.03 |
| Zm00001d022393_P001 | Maize | cytosol | 52.08 | 49.02 |
| HORVU2Hr1G022900.2 | Barley | cytosol | 50.69 | 48.99 |
| TraesCS2A01G130700.1 | Wheat | cytosol | 50.69 | 48.99 |
| TraesCS2D01G132700.1 | Wheat | cytosol | 50.69 | 48.99 |
| TraesCS2B01G152800.1 | Wheat | cytosol | 51.39 | 48.37 |
| AT4G35450.5 | Thale cress | cytosol, plastid | 27.78 | 11.43 |
| AT2G17390.1 | Thale cress | cytosol | 23.61 | 9.88 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.2 | EntrezGene:831107 | UniProt:A0A178UH69 | ProteinID:AED91791.1 | EMBL:AK118824 |
| ArrayExpress:AT5G12320 | EnsemblPlantsGene:AT5G12320 | RefSeq:AT5G12320 | TAIR:AT5G12320 | RefSeq:AT5G12320-TAIR-G | EnsemblPlants:AT5G12320.1 |
| TAIR:AT5G12320.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | EMBL:BT005649 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0008150 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_568265.2 | ProteinID:OAO91991.1 |
| PFAM:PF13857 | PO:PO:0000293 | PRINTS:PR01415 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR45387 |
| UniProt:Q8GWI1 | SMART:SM00248 | SUPFAM:SSF48403 | UniParc:UPI000000C6E4 | : | : |
Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GWI1]
Coordinates
chr5:+:3982577..3984112
Molecular Weight (calculated)
15664.5 Da
IEP (calculated)
4.245
GRAVY (calculated)
-0.181
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAETNGVAE KVDDLLEAAR YNDIDDLRTL ASDGLSLHSR DSQGRTALHM AAANGHMTIV EYLISEGVDI NALNDENNAP LHWACLNGHV EVVKRLILAG
101: ASLSLLNRYE RTPMDEAIGA EKMEIIDAIN TTVAQMELEN TSMT
101: ASLSLLNRYE RTPMDEAIGA EKMEIIDAIN TTVAQMELEN TSMT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.