Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69689 | Canola | cytosol | 100.0 | 100.0 |
| AT5G12320.1 | Thale cress | cytosol | 86.11 | 86.11 |
| Solyc04g008580.2.1 | Tomato | cytosol | 54.17 | 66.67 |
| PGSC0003DMT400080573 | Potato | cytosol | 61.11 | 57.89 |
| VIT_06s0009g03440.t01 | Wine grape | cytosol | 59.03 | 56.67 |
| KRH43442 | Soybean | cytosol | 56.94 | 52.23 |
| Zm00001d022393_P001 | Maize | cytosol | 54.17 | 50.98 |
| EER99842 | Sorghum | cytosol | 54.86 | 50.97 |
| HORVU2Hr1G022900.2 | Barley | cytosol | 52.08 | 50.34 |
| GSMUA_AchrUn_... | Banana | extracellular | 59.03 | 49.71 |
| TraesCS2A01G130700.1 | Wheat | cytosol | 51.39 | 49.66 |
| TraesCS2D01G132700.1 | Wheat | cytosol | 51.39 | 49.66 |
| TraesCS2B01G152800.1 | Wheat | cytosol | 52.08 | 49.02 |
| Bra010534.1-P | Field mustard | cytosol, plastid | 29.17 | 12.03 |
| Bra011616.1-P | Field mustard | cytosol, plastid | 28.47 | 11.85 |
| Bra017710.1-P | Field mustard | cytosol, plastid | 27.78 | 11.43 |
| Bra003952.1-P | Field mustard | nucleus | 12.5 | 10.23 |
Protein Annotations
| EnsemblPlants:Bra008899.1 | EnsemblPlants:Bra008899.1-P | EnsemblPlantsGene:Bra008899 | Gene3D:1.25.40.20 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | InterPro:IPR002110 | InterPro:IPR020683 |
| InterPro:IPR036770 | PANTHER:PTHR45387 | PFAM:PF13637 | PFscan:PS50088 | PFscan:PS50297 | PRINTS:PR01415 |
| SMART:SM00248 | SUPFAM:SSF48403 | UniParc:UPI0002543D3C | UniProt:M4CXF2 | MapMan:35.2 | : |
Description
AT5G12320 (E=3e-067) | ankyrin repeat family protein
Coordinates
chrA10:-:14347530..14348458
Molecular Weight (calculated)
15625.6 Da
IEP (calculated)
4.221
GRAVY (calculated)
-0.094
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAETVVEAE KIDDLLEAAR YNDIDDLKSL AFDGVSLNSR DSQGRTALHM AAANGHMSIV EYLISQGVDI NALNEENNAP LHWACLNGHI EVVKKMILAG
101: ASLSLLNRYE RTPMDEAIGA GKMEIIDAIN TTVPQMELEN TTVA
101: ASLSLLNRYE RTPMDEAIGA GKMEIIDAIN TTVPQMELEN TTVA
001: MGAETNGVAE KVDDLLEAAR YNDIDDLRTL ASDGLSLHSR DSQGRTALHM AAANGHMTIV EYLISEGVDI NALNDENNAP LHWACLNGHV EVVKRLILAG
101: ASLSLLNRYE RTPMDEAIGA EKMEIIDAIN TTVAQMELEN TSMT
101: ASLSLLNRYE RTPMDEAIGA EKMEIIDAIN TTVAQMELEN TSMT
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q8GWI1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.