CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
endoplasmic reticulum 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0851700-01	Rice	plasma membrane	78.06	78.29
EER97033	Sorghum	cytosol	61.54	66.87
TraesCS5B01G542600.1	Wheat	nucleus	74.36	66.41
GSMUA_AchrUn_...	Banana	nucleus	62.96	65.19
EES15272	Sorghum	cytosol	61.82	64.78
TraesCS5D01G545200.1	Wheat	cytosol	72.36	63.82
GSMUA_Achr8P09410_001	Banana	cytosol	61.82	63.64
TraesCS4A01G328600.1	Wheat	cytosol	74.93	62.92
HORVU5Hr1G122820.3	Barley	cytosol	71.79	62.38
KRH62564	Soybean	nucleus	61.54	61.71
KRH56373	Soybean	cytosol	61.82	61.65
PGSC0003DMT400061066	Potato	cytosol	60.4	60.4
VIT_03s0038g04270.t01	Wine grape	cytosol	61.54	60.34
CDY41654	Canola	cytosol, plastid	56.7	59.05
PGSC0003DMT400062098	Potato	cytosol	56.98	57.47
CDX75504	Canola	cytosol, plastid	56.41	57.23
Bra011616.1-P	Field mustard	cytosol, plastid	56.41	57.23
CDX69141	Canola	cytosol, plastid	56.13	56.94
Bra017710.1-P	Field mustard	cytosol, plastid	56.7	56.86
CDX72536	Canola	cytosol, plastid	55.84	56.81
CDY24333	Canola	plastid	55.27	56.73
AT2G17390.1	Thale cress	cytosol	55.56	56.69
CDY24811	Canola	cytosol, plastid	56.13	56.61
AT4G35450.5	Thale cress	cytosol, plastid	56.41	56.57
CDY49426	Canola	cytosol	54.7	56.47
CDY40634	Canola	cytosol, plastid	56.13	56.45
Bra010534.1-P	Field mustard	cytosol, plastid	55.56	55.87
EER99842	Sorghum	cytosol	12.54	28.39

Protein Annotations

Gene3D:1.25.40.20	MapMan:23.1.1.1	EntrezGene:8061402	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
UniProt:C5WS25	EnsemblPlants:EER93086	ProteinID:EER93086	ProteinID:EER93086.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0008150	GO:GO:0009536	GO:GO:0016020	GO:GO:0030941	GO:GO:0031359	GO:GO:0045036
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796	PIRSF:PIRSF000654	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR44453	PANTHER:PTHR44453:SF1	SMART:SM00248	EnsemblPlantsGene:SORBI_3001G010100	SUPFAM:SSF48403
unigene:Sbi.9266	UniParc:UPI0001A8281A	RefSeq:XP_002466088.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:909734..911888

Molecular Weight (calculated)

37269.6 Da

IEP (calculated)

4.334

GRAVY (calculated)

-0.495

Length

351 amino acids

Sequence
(BLAST)

001: MAAQEEKTAT AVTTEEPAPA AEPQPKPAAA ARRAGPSASA NPFDFSTMMN LLNDPSIKEM AEQIAKDPAF TEMAEQLQKT VVSPRQRQQQ QAASAAAAAQ
101: LDPQKYVATM QQLMQNPQFV AMAERLGSAL MQDPAVSTML GGLTNPAHKE QLEARVARMK DDPDLKPILD EIESGGPAAM MKYWNDPEAL QKFGRAMGVG
201: GGPSGEAGGA EHAEAEDDAG EEGEYEDESI VHHTASIGDV EGLKKALEDG ADKDEEDSEG RRGLHFACGY GELQCAQALL EAGAAVDAVD KNKNTALHYA
301: AGYGRKDCVA LLLESGAAVT LQNLDGKTPI DVAKLNNQDD VLKLLEKHAF V

Best Arabidopsis Sequence Match ( AT4G35450.1 )
(BLAST)

001: MASNSEKNPL LSDEKPKSTE ENKSSKPESA SGSSTSSAMP GLNFNAFDFS NMASILNDPS IREMAEQIAK DPAFNQLAEQ LQRSIPNAGQ EGGFPNFDPQ
101: QYVNTMQQVM HNPEFKTMAE KLGTALVQDP QMSPFLDAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW NDPEVLKKLG EAMGMPVAGL
201: PDQTVSAEPE VAEEGEEEES IVHQTASLGD VEGLKAALAS GGNKDEEDSE GRTALHFACG YGELKCAQVL IDAGASVNAV DKNKNTPLHY AAGYGRKECV
301: SLLLENGAAV TLQNLDEKTP IDVAKLNSQL EVVKLLEKDA FL

Arabidopsis Description

AKR2Ankyrin repeat-containing protein 2 [Source:UniProtKB/TrEMBL;Acc:F4JN13]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.