Factsheet for TraesCS5B01G542600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G545200.1	Wheat	cytosol	88.55	87.44
TraesCS4A01G328600.1	Wheat	cytosol	89.82	84.45
Os03t0851700-01	Rice	plasma membrane	67.43	75.71
EER93086	Sorghum	cytosol	66.41	74.36
HORVU5Hr1G122820.3	Barley	cytosol	76.34	74.26
GSMUA_AchrUn_...	Banana	nucleus	55.98	64.9
GSMUA_Achr8P09410_001	Banana	cytosol	54.45	62.76
TraesCS5B01G296200.1	Wheat	cytosol	52.67	62.73
TraesCS7B01G164200.1	Wheat	cytosol	51.91	60.18
VIT_03s0038g04270.t01	Wine grape	cytosol	54.71	60.06
PGSC0003DMT400061066	Potato	cytosol	53.44	59.83
KRH56373	Soybean	cytosol	52.93	59.09
KRH62564	Soybean	nucleus	52.42	58.86
PGSC0003DMT400062098	Potato	cytosol	51.91	58.62
AT2G17390.1	Thale cress	cytosol	49.62	56.69
CDY41654	Canola	cytosol, plastid	48.35	56.38
CDY24811	Canola	cytosol, plastid	49.62	56.03
Bra017710.1-P	Field mustard	cytosol, plastid	49.87	56.0
AT4G35450.5	Thale cress	cytosol, plastid	49.87	56.0
CDX72536	Canola	cytosol, plastid	49.11	55.94
CDX69141	Canola	cytosol, plastid	49.11	55.78
CDY40634	Canola	cytosol, plastid	49.36	55.59
CDX75504	Canola	cytosol, plastid	48.85	55.49
Bra010534.1-P	Field mustard	cytosol, plastid	49.11	55.3
Bra011616.1-P	Field mustard	cytosol, plastid	48.6	55.2
CDY49426	Canola	cytosol	46.56	53.82
CDY24333	Canola	plastid	46.82	53.8
TraesCS2B01G152800.1	Wheat	cytosol	9.92	25.49

Protein Annotations

Gene3D:1.25.40.20	MapMan:23.1.1.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770
PFAM:PF12796	PIRSF:PIRSF000654	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44453	PANTHER:PTHR44453:SF1
SMART:SM00248	SUPFAM:SSF48403	EnsemblPlantsGene:TraesCS5B01G542600	EnsemblPlants:TraesCS5B01G542600.1	TIGR:cd00204	SEG:seg

Description

No Description!

Coordinates

chr5B:-:696188970..696191180

Molecular Weight (calculated)

41253.2 Da

IEP (calculated)

4.267

GRAVY (calculated)

-0.415

Length

393 amino acids

Sequence
(BLAST)

001: MATTQEAEKT SVVEAVEEAS PAAAAAPAEE KTSVKAVQEP SPAAAAPAEE KTSVKAEEEP SPAAAAAEGQ RRPPAATAAR RAGAPASPFD FSTMMNLLND
101: PSIKEMAEQI AKDPSFSEMA EQLQKTVAPA PARSPQEVAA ALDPQKYVST MQQLMQNPQF VAMAERLGSA LMQDPAMSSV LGGLTNPAHK EQLQARVARM
201: KDDPSLKPIL DEIESGGPAA MMKYWNDPEA LQKFGRAMGV GPSGAAAGAE AEAEEEEEVA AGEEGEYEEE SIIHQTASVG DVEGLKKALA EGVDKDEEDS
301: EGRRGLHFAC GYGELGCAQA LLEAGAAADA VDKNKNTALH YAAGYGRQEC VALLVDHGAS VTLQNLDGKT AIDVARLNSQ EEVLKLLEKH AYV

Best Arabidopsis Sequence Match ( AT2G17390.1 )
(BLAST)

001: MASSSEKTPL IPSDEKNDTK EESKSTTKPE SGSGAPPSPS PTDPGLDFNA FDFSGMAGIL NDPSIKELAE QIAKDPSFNQ LAEQLQRSVP TGSHEGGLPN
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL

Arabidopsis Description

AKR2BAnkyrin repeat domain-containing protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q29Q26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.