Factsheet for HORVU5Hr1G122820.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G545200.1	Wheat	cytosol	78.96	80.15
TraesCS5B01G542600.1	Wheat	nucleus	74.26	76.34
Os03t0851700-01	Rice	plasma membrane	64.6	74.57
TraesCS4A01G328600.1	Wheat	cytosol	75.74	73.21
EER93086	Sorghum	cytosol	62.38	71.79
GSMUA_AchrUn_...	Banana	nucleus	54.46	64.9
GSMUA_Achr8P09410_001	Banana	cytosol	53.47	63.34
PGSC0003DMT400061066	Potato	cytosol	53.96	62.11
VIT_03s0038g04270.t01	Wine grape	cytosol	54.7	61.73
KRH56373	Soybean	cytosol	53.22	61.08
KRH62564	Soybean	nucleus	51.98	60.0
PGSC0003DMT400062098	Potato	cytosol	51.24	59.48
AT4G35450.5	Thale cress	cytosol, plastid	49.01	56.57
CDY41654	Canola	cytosol, plastid	47.03	56.38
CDX69141	Canola	cytosol, plastid	48.02	56.07
CDY40634	Canola	cytosol, plastid	48.27	55.87
CDY24811	Canola	cytosol, plastid	48.02	55.75
Bra017710.1-P	Field mustard	cytosol, plastid	48.27	55.71
CDX72536	Canola	cytosol, plastid	47.52	55.65
CDX75504	Canola	cytosol, plastid	47.52	55.49
Bra011616.1-P	Field mustard	cytosol, plastid	47.52	55.49
Bra010534.1-P	Field mustard	cytosol, plastid	47.52	55.01
AT2G17390.1	Thale cress	cytosol	46.78	54.94
HORVU5Hr1G078120.2	Barley	plastid	50.74	54.67
CDY49426	Canola	cytosol	44.8	53.24
CDY24333	Canola	plastid	45.05	53.22
HORVU7Hr1G055860.1	Barley	cytosol, mitochondrion	50.99	52.55
HORVU2Hr1G022900.2	Barley	cytosol	9.9	26.85

Protein Annotations

Gene3D:1.25.40.20	MapMan:23.1.1.1	UniProt:A0A287T0G2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G122820	EnsemblPlants:HORVU5Hr1G122820.3	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796	PIRSF:PIRSF000654	PFscan:PS50088	PFscan:PS50297
PANTHER:PTHR44453	PANTHER:PTHR44453:SF1	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI000B460B6D	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:662814350..662816514

Molecular Weight (calculated)

42605.1 Da

IEP (calculated)

4.457

GRAVY (calculated)

-0.359

Length

404 amino acids

Sequence
(BLAST)

001: MATTQEAEKT SVVVKAEEEP SPTATAAAPA EEKASVKAVE EPSPAAAAAV AEGQRPQPAA TAARRAGAPA SPFDFSTMMN LLNDPSIKEM AEQIAKDPSF
101: SEMAEQLQKT VAPAPASSAR SPQEVAAALD PQKYVSTMQQ LMQNPQFVAM AERLGSALMQ DPAMSSVLGG LTNPAQKEQL EARVARMKDD PSLKPILDEI
201: ESGGPAAMMK YARKHLHFLP PATTLMATGS SFQLRYWNDP EALQKFGRAM GVGPSGAAAA GAEAEEEEVV AGGEEGEYEE ESVIHQTASV GDVEGLQKAL
301: ADGVDKDEED SEGRRGLHFA CGYGELKCAQ ALLEAGAAAD AVDKNKNTAL HYAAGYGRKE CVALLLDHGA SVTLQNLDGK TAIDVARLNS QEEVLKLLEK
401: HAYV

Best Arabidopsis Sequence Match ( AT4G35450.1 )
(BLAST)

001: MASNSEKNPL LSDEKPKSTE ENKSSKPESA SGSSTSSAMP GLNFNAFDFS NMASILNDPS IREMAEQIAK DPAFNQLAEQ LQRSIPNAGQ EGGFPNFDPQ
101: QYVNTMQQVM HNPEFKTMAE KLGTALVQDP QMSPFLDAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW NDPEVLKKLG EAMGMPVAGL
201: PDQTVSAEPE VAEEGEEEES IVHQTASLGD VEGLKAALAS GGNKDEEDSE GRTALHFACG YGELKCAQVL IDAGASVNAV DKNKNTPLHY AAGYGRKECV
301: SLLLENGAAV TLQNLDEKTP IDVAKLNSQL EVVKLLEKDA FL

Arabidopsis Description

AKR2Ankyrin repeat-containing protein 2 [Source:UniProtKB/TrEMBL;Acc:F4JN13]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.