Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75504 | Canola | cytosol, plastid | 97.69 | 97.69 |
| Bra011616.1-P | Field mustard | cytosol, plastid | 97.4 | 97.4 |
| CDX72536 | Canola | cytosol, plastid | 89.6 | 89.86 |
| CDY24811 | Canola | cytosol, plastid | 89.31 | 88.79 |
| CDY41654 | Canola | cytosol, plastid | 82.37 | 84.57 |
| AT4G35450.5 | Thale cress | cytosol, plastid | 85.26 | 84.29 |
| CDY40634 | Canola | cytosol, plastid | 81.5 | 80.8 |
| CDY49426 | Canola | cytosol | 73.7 | 75.0 |
| CDY24333 | Canola | plastid | 73.99 | 74.85 |
| TraesCS7D01G266800.1 | Wheat | cytosol | 54.05 | 63.82 |
| EER97033 | Sorghum | cytosol | 59.25 | 63.47 |
| Zm00001d021126_P002 | Maize | extracellular | 58.96 | 63.16 |
| Solyc01g104170.2.1 | Tomato | plastid | 63.29 | 62.75 |
| PGSC0003DMT400061066 | Potato | cytosol | 63.29 | 62.39 |
| EES15272 | Sorghum | cytosol | 60.4 | 62.39 |
| VIT_03s0038g04270.t01 | Wine grape | cytosol | 64.16 | 62.01 |
| Zm00001d052700_P001 | Maize | extracellular | 59.83 | 61.79 |
| KRH62564 | Soybean | nucleus | 62.43 | 61.71 |
| KRH56373 | Soybean | cytosol | 61.27 | 60.23 |
| TraesCS5D01G304000.1 | Wheat | cytosol | 56.94 | 59.7 |
| TraesCS5B01G296200.1 | Wheat | cytosol | 56.94 | 59.7 |
| TraesCS5A01G296900.1 | Wheat | plastid | 56.94 | 59.7 |
| TraesCS7B01G164200.1 | Wheat | cytosol | 58.38 | 59.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.09 | 59.29 |
| Os03t0851700-01 | Rice | plasma membrane | 59.83 | 59.14 |
| Os09t0513000-01 | Rice | plasma membrane, plastid | 56.07 | 58.97 |
| PGSC0003DMT400062098 | Potato | cytosol | 58.96 | 58.62 |
| GSMUA_Achr8P09410_001 | Banana | cytosol | 56.94 | 57.77 |
| EER93086 | Sorghum | cytosol | 56.94 | 56.13 |
| HORVU5Hr1G078120.2 | Barley | plastid | 58.09 | 53.6 |
| HORVU7Hr1G055860.1 | Barley | cytosol, mitochondrion | 56.65 | 50.0 |
| TraesCS5B01G542600.1 | Wheat | nucleus | 55.78 | 49.11 |
| Solyc10g024330.1.1 | Tomato | nucleus | 38.44 | 48.9 |
| TraesCS5D01G545200.1 | Wheat | cytosol | 56.07 | 48.74 |
| HORVU5Hr1G122820.3 | Barley | cytosol | 56.07 | 48.02 |
| TraesCS4A01G328600.1 | Wheat | cytosol | 56.65 | 46.89 |
| Os08t0539600-01 | Rice | nucleus | 25.43 | 41.31 |
| CDX69689 | Canola | cytosol | 11.56 | 27.78 |
| CDX68340 | Canola | nucleus | 14.16 | 27.68 |
| CDY23498 | Canola | cytosol, mitochondrion, nucleus | 17.34 | 26.09 |
| CDX97184 | Canola | cytosol | 11.56 | 24.84 |
| Os07t0659100-01 | Rice | cytosol | 1.45 | 23.81 |
Protein Annotations
| Gene3D:1.10.260.100 | Gene3D:1.25.40.20 | MapMan:23.1.1.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| EnsemblPlants:CDX69141 | ProteinID:CDX69141 | ProteinID:CDX69141.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSBRNA2T00130928001 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 | PFAM:PF13637 | PIRSF:PIRSF000654 |
| PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR44453 | SMART:SM00248 | SUPFAM:SSF48403 | UniParc:UPI0004EE6918 |
| SEG:seg | : | : | : | : | : |
Description
BnaC01g03120D
Coordinates
chrLK031789:+:3138800..3140947
Molecular Weight (calculated)
37122.4 Da
IEP (calculated)
4.221
GRAVY (calculated)
-0.538
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNPEKNPP PPSDEKTETK SPKAESARAS GSSPSSANPA MNFNAFDFSN MASILNDPSI RELAEQIAKD PAFNKLAEQL QSSIPNAAEG GGAGGFPNID
101: PQQYVSTMQQ VMHNPEFQTM AERLGNALVK DPQMSPFLDA FSNPETAEHF TERMARMKED PELKPILDEI DAGGPSAMMK YWNDKDVLKK LGEAMGMPVA
201: GLPAQAASAE PEVAEEEGEE EEESIVHQTA SLGDVEGLKT ALEAGGNKDE EDSEGRTALH FACGYGELKC AQVLIDAGAS VNAVDKNKNT PLHYAAGYGR
301: KECVSLLLEN GAAVTLQNLD EKTPIDVAKL NNQLEVVKLL EKDAFL
101: PQQYVSTMQQ VMHNPEFQTM AERLGNALVK DPQMSPFLDA FSNPETAEHF TERMARMKED PELKPILDEI DAGGPSAMMK YWNDKDVLKK LGEAMGMPVA
201: GLPAQAASAE PEVAEEEGEE EEESIVHQTA SLGDVEGLKT ALEAGGNKDE EDSEGRTALH FACGYGELKC AQVLIDAGAS VNAVDKNKNT PLHYAAGYGR
301: KECVSLLLEN GAAVTLQNLD EKTPIDVAKL NNQLEVVKLL EKDAFL
001: MASNSEKNPL LSDEKPKSTE ENKSSKPESA SGSSTSSAMP GLNFNAFDFS NMASILNDPS IREMAEQIAK DPAFNQLAEQ LQRSIPNAGQ EGGFPNFDPQ
101: QYVNTMQQVM HNPEFKTMAE KLGTALVQDP QMSPFLDAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW NDPEVLKKLG EAMGMPVAGL
201: PDQTVSAEPE VAEEGEEEES IVHQTASLGD VEGLKAALAS GGNKDEEDSE GRTALHFACG YGELKCAQVL IDAGASVNAV DKNKNTPLHY AAGYGRKECV
301: SLLLENGAAV TLQNLDEKTP IDVAKLNSQL EVVKLLEKDA FL
101: QYVNTMQQVM HNPEFKTMAE KLGTALVQDP QMSPFLDAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW NDPEVLKKLG EAMGMPVAGL
201: PDQTVSAEPE VAEEGEEEES IVHQTASLGD VEGLKAALAS GGNKDEEDSE GRTALHFACG YGELKCAQVL IDAGASVNAV DKNKNTPLHY AAGYGRKECV
301: SLLLENGAAV TLQNLDEKTP IDVAKLNSQL EVVKLLEKDA FL
Arabidopsis Description
AKR2Ankyrin repeat-containing protein 2 [Source:UniProtKB/TrEMBL;Acc:F4JN13]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.