Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400062098 | Potato | cytosol | 89.71 | 70.11 |
| Solyc01g104170.2.1 | Tomato | plastid | 75.37 | 58.74 |
| VIT_03s0038g04270.t01 | Wine grape | cytosol | 65.81 | 50.0 |
| KRH56373 | Soybean | cytosol | 62.13 | 48.01 |
| KRH62564 | Soybean | nucleus | 61.76 | 48.0 |
| AT2G17390.1 | Thale cress | cytosol | 53.31 | 42.15 |
| CDX72536 | Canola | cytosol, plastid | 51.1 | 40.29 |
| CDY41654 | Canola | cytosol, plastid | 49.63 | 40.06 |
| CDY49426 | Canola | cytosol | 50.0 | 40.0 |
| CDY24333 | Canola | plastid | 50.0 | 39.77 |
| CDY24811 | Canola | cytosol, plastid | 50.0 | 39.08 |
| Bra010534.1-P | Field mustard | cytosol, plastid | 50.0 | 38.97 |
| CDX69141 | Canola | cytosol, plastid | 48.9 | 38.44 |
| AT4G35450.5 | Thale cress | cytosol, plastid | 49.26 | 38.29 |
| CDX75504 | Canola | cytosol, plastid | 48.16 | 37.86 |
| Bra011616.1-P | Field mustard | cytosol, plastid | 48.16 | 37.86 |
| CDY40634 | Canola | cytosol, plastid | 48.53 | 37.82 |
| Bra017710.1-P | Field mustard | cytosol, plastid | 48.53 | 37.71 |
| Solyc04g008580.2.1 | Tomato | cytosol | 4.04 | 9.4 |
| Solyc10g024340.1.1 | Tomato | extracellular | 1.84 | 4.95 |
Protein Annotations
| EnsemblPlants:Solyc10g024330.1.1 | EnsemblPlantsGene:Solyc10g024330.1 | Gene3D:1.25.40.20 | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | InterPro:IPR020683 |
| InterPro:IPR036770 | PANTHER:PTHR44453 | PFscan:PS50297 | SEG:seg | SUPFAM:SSF48403 | UniParc:UPI000276ABAC |
| UniProt:K4CZ52 | MapMan:23.1.1.1 | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:13503977..13508142
Molecular Weight (calculated)
29547.1 Da
IEP (calculated)
4.147
GRAVY (calculated)
-0.700
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHAEKVVLT AKEDEKSGSS ENKKASESAS TEAQTGETRK TSAAGAGLQN PFDFSAMTGL LNDPSIKELA EQIAKYPSFN QMTEQLQQTF QGAAEEDNIP
101: NFDSQQYYSA MQHVMQNPQF MSMAEQLGSA LMQDPSMSSM LENLTNSSQK DQLEERLTCI KEDPSLKPIL EEIESGGPAA MMRYWNDQDV LKKLGEAMGF
201: AVAGEGATSA EVSGPDETEK ADDDESSVHQ CASVGDVEGL KNVIASVADK NKEDSEGRTS LHFACEYGEV RK
101: NFDSQQYYSA MQHVMQNPQF MSMAEQLGSA LMQDPSMSSM LENLTNSSQK DQLEERLTCI KEDPSLKPIL EEIESGGPAA MMRYWNDQDV LKKLGEAMGF
201: AVAGEGATSA EVSGPDETEK ADDDESSVHQ CASVGDVEGL KNVIASVADK NKEDSEGRTS LHFACEYGEV RK
001: MASSSEKTPL IPSDEKNDTK EESKSTTKPE SGSGAPPSPS PTDPGLDFNA FDFSGMAGIL NDPSIKELAE QIAKDPSFNQ LAEQLQRSVP TGSHEGGLPN
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL
Arabidopsis Description
AKR2BAnkyrin repeat domain-containing protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q29Q26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.