Factsheet for Solyc10g024340.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G266800.1	Wheat	cytosol	69.31	23.89
Solyc04g008580.2.1	Tomato	cytosol	26.73	23.08
Zm00001d052700_P001	Maize	extracellular	73.27	22.09
EES15272	Sorghum	cytosol	72.28	21.79
Solyc01g104170.2.1	Tomato	plastid	72.28	20.92
TraesCS7B01G164200.1	Wheat	cytosol	69.31	20.65
HORVU7Hr1G055860.1	Barley	cytosol, mitochondrion	64.36	16.58
Os08t0539600-01	Rice	nucleus	3.96	1.88
Solyc10g024330.1.1	Tomato	nucleus	4.95	1.84

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0008150	GO:GO:0009536	GO:GO:0016020	GO:GO:0030941	GO:GO:0031359
GO:GO:0045036	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	UniProt:K4CZ53	PFAM:PF13857
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44453	SMART:SM00248	SUPFAM:SSF48403	EnsemblPlantsGene:Solyc10g024340.1
EnsemblPlants:Solyc10g024340.1.1	UniParc:UPI000276ABAD	:	:	:	:

Description

No Description!

Coordinates

chr10:+:13511154..13512159

Molecular Weight (calculated)

11026.5 Da

IEP (calculated)

8.482

GRAVY (calculated)

0.141

Length

101 amino acids

Sequence
(BLAST)

001: MYPGFCVFQH SKVFGFQMVL AKVKCAQVLL EAGAEVDALN KNKNTALHYA AGYGRKECVV LLLKNGAAVT LQNLDGKTPI DVAKLNNQNE VLTLLEKDAF
101: L

Best Arabidopsis Sequence Match ( AT4G35450.1 )
(BLAST)

001: MASNSEKNPL LSDEKPKSTE ENKSSKPESA SGSSTSSAMP GLNFNAFDFS NMASILNDPS IREMAEQIAK DPAFNQLAEQ LQRSIPNAGQ EGGFPNFDPQ
101: QYVNTMQQVM HNPEFKTMAE KLGTALVQDP QMSPFLDAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW NDPEVLKKLG EAMGMPVAGL
201: PDQTVSAEPE VAEEGEEEES IVHQTASLGD VEGLKAALAS GGNKDEEDSE GRTALHFACG YGELKCAQVL IDAGASVNAV DKNKNTPLHY AAGYGRKECV
301: SLLLENGAAV TLQNLDEKTP IDVAKLNSQL EVVKLLEKDA FL

Arabidopsis Description

AKR2Ankyrin repeat-containing protein 2 [Source:UniProtKB/TrEMBL;Acc:F4JN13]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.