Factsheet for Zm00001d052700_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15272	Sorghum	cytosol	96.72	96.72
TraesCS7D01G266800.1	Wheat	cytosol	74.93	85.67
TraesCS7B01G164200.1	Wheat	cytosol	85.37	84.37
Zm00001d021126_P002	Maize	extracellular	77.31	80.19
Solyc10g024340.1.1	Tomato	extracellular	22.09	73.27
HORVU7Hr1G055860.1	Barley	cytosol, mitochondrion	83.58	71.43
KRH56373	Soybean	cytosol	69.25	65.91
KRH62564	Soybean	nucleus	68.66	65.71
VIT_03s0038g04270.t01	Wine grape	cytosol	69.55	65.08
PGSC0003DMT400061066	Potato	cytosol	67.16	64.1
CDY41654	Canola	cytosol, plastid	63.58	63.2
PGSC0003DMT400062098	Potato	cytosol	63.88	61.49
CDX72536	Canola	cytosol, plastid	62.39	60.58
Bra017710.1-P	Field mustard	cytosol, plastid	63.28	60.57
CDY40634	Canola	cytosol, plastid	62.99	60.46
CDX75504	Canola	cytosol, plastid	62.39	60.4
Bra011616.1-P	Field mustard	cytosol, plastid	62.39	60.4
CDY24811	Canola	cytosol, plastid	62.39	60.06
CDX69141	Canola	cytosol, plastid	61.79	59.83
AT4G35450.5	Thale cress	cytosol, plastid	62.39	59.71
CDY49426	Canola	cytosol	60.3	59.41
CDY24333	Canola	plastid	60.6	59.36
Bra010534.1-P	Field mustard	cytosol, plastid	61.79	59.31
AT2G17390.1	Thale cress	cytosol	60.6	59.01
Os08t0539600-01	Rice	nucleus	31.94	50.23
Zm00001d022393_P001	Maize	cytosol	13.43	29.41

Protein Annotations

Gene3D:1.25.40.20	EntrezGene:100274450	MapMan:23.1.1.1	ProteinID:AQK57769.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	UniProt:B4G137	EMBL:BT043075	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	PFAM:PF12796	PIRSF:PIRSF000654	PFscan:PS50088
PFscan:PS50297	PANTHER:PTHR44453	PANTHER:PTHR44453:SF2	SMART:SM00248	SUPFAM:SSF48403	UniParc:UPI00017B7C5D
EnsemblPlantsGene:Zm00001d052700	EnsemblPlants:Zm00001d052700_P001	EnsemblPlants:Zm00001d052700_T001	SEG:seg	:	:

Description

Ankyrin repeat domain-containing protein 2A

Coordinates

chr4:+:198053637..198078894

Molecular Weight (calculated)

36252.2 Da

IEP (calculated)

4.237

GRAVY (calculated)

-0.721

Length

335 amino acids

Sequence
(BLAST)

001: MASSGDPPGS ADEKKTPKSE GSSDERQGLP PAGFSNPFDF GSMQSLLNDP SIKEMADQIA RDPAFNRMAE QLQRSAQSTG EQGTPPLNPQ QYMETMQKVM
101: ENPQFMTMAE RLGNALMQDP AMSSMLETFS SPSHKEQLEE RMSRIKEDPA MKSILDELEN GGPSAMMKYW NDPDTLQKIG EAMGASFPFG AGSSAEPSGT
201: EETEEEGGDD DESIVHHTAS VGDEEGLKKA LDGGADKDEE DSEGRRALHF ACGYGELKCA QILLEAGAAV DALDKNKNTP LHYAAGYGRK ECVDLLLKHG
301: AAVTLQNLDG KTPIDVAKLN NQDEVLKLLE KDAFL

Best Arabidopsis Sequence Match ( AT4G35450.1 )
(BLAST)

001: MASNSEKNPL LSDEKPKSTE ENKSSKPESA SGSSTSSAMP GLNFNAFDFS NMASILNDPS IREMAEQIAK DPAFNQLAEQ LQRSIPNAGQ EGGFPNFDPQ
101: QYVNTMQQVM HNPEFKTMAE KLGTALVQDP QMSPFLDAFS NPETAEHFTE RMARMKEDPE LKPILDEIDA GGPSAMMKYW NDPEVLKKLG EAMGMPVAGL
201: PDQTVSAEPE VAEEGEEEES IVHQTASLGD VEGLKAALAS GGNKDEEDSE GRTALHFACG YGELKCAQVL IDAGASVNAV DKNKNTPLHY AAGYGRKECV
301: SLLLENGAAV TLQNLDEKTP IDVAKLNSQL EVVKLLEKDA FL

Arabidopsis Description

AKR2Ankyrin repeat-containing protein 2 [Source:UniProtKB/TrEMBL;Acc:F4JN13]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.