Factsheet for Os09t0513000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021126_P002	Maize	extracellular	83.89	85.45
EER97033	Sorghum	cytosol	82.37	83.9
TraesCS5A01G296900.1	Wheat	plastid	83.89	83.64
TraesCS5D01G304000.1	Wheat	cytosol	82.67	82.42
TraesCS5B01G296200.1	Wheat	cytosol	82.37	82.12
HORVU5Hr1G078120.2	Barley	plastid	77.81	68.27
KRH62564	Soybean	nucleus	67.78	63.71
PGSC0003DMT400061066	Potato	cytosol	67.78	63.53
KRH56373	Soybean	cytosol	67.78	63.35
VIT_03s0038g04270.t01	Wine grape	cytosol	68.09	62.57
Os03t0851700-01	Rice	plasma membrane	65.35	61.43
PGSC0003DMT400062098	Potato	cytosol	64.74	61.21
CDY41654	Canola	cytosol, plastid	60.79	59.35
AT4G35450.5	Thale cress	cytosol, plastid	60.79	57.14
CDX72536	Canola	cytosol, plastid	59.57	56.81
AT2G17390.1	Thale cress	cytosol	59.27	56.69
Bra017710.1-P	Field mustard	cytosol, plastid	60.18	56.57
CDY40634	Canola	cytosol, plastid	59.88	56.45
CDX75504	Canola	cytosol, plastid	59.27	56.36
Bra011616.1-P	Field mustard	cytosol, plastid	59.27	56.36
CDY49426	Canola	cytosol	58.05	56.18
CDY24333	Canola	plastid	58.36	56.14
CDX69141	Canola	cytosol, plastid	58.97	56.07
CDY24811	Canola	cytosol, plastid	59.27	56.03
Bra010534.1-P	Field mustard	cytosol, plastid	58.97	55.59
Os08t0539600-01	Rice	nucleus	29.48	45.54
Os07t0659100-01	Rice	cytosol	1.82	28.57

Protein Annotations

Gene3D:1.25.40.20	MapMan:23.1.1.1	EntrezGene:4347554	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
ProteinID:BAD34416.1	ProteinID:BAT08928.1	ProteinID:EAZ12772.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0008150
GO:GO:0009536	GO:GO:0016020	GO:GO:0030941	GO:GO:0031359	GO:GO:0045036	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	EnsemblPlantsGene:Os09g0513000	EnsemblPlants:Os09t0513000-01	PFAM:PF13637	PIRSF:PIRSF000654
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44453	PANTHER:PTHR44453:SF2	UniProt:Q69IN8	SMART:SM00248
SUPFAM:SSF48403	UniParc:UPI00003FF5C1	RefSeq:XP_015612271.1	SEG:seg	:	:

Description

XA21 binding protein 25Similar to TGB12K interacting protein 3. (Os09t0513000-01)

Coordinates

chr9:+:19961104..19964106

Molecular Weight (calculated)

35524.6 Da

IEP (calculated)

4.173

GRAVY (calculated)

-0.584

Length

329 amino acids

Sequence
(BLAST)

001: MEDQKKNAKP EGSSGSQRGA PPAPDAGLPN PFDFSQFSNL LNDPSIKEMA EQIASDPVFT QMAEQLQKSA HVTGEQGGPA LDPQQYMETM TQVMQNPQFM
101: SMAERLGNTL MQDPGMSSML ESLTSPSHKE LLEERMSRIK EDPSLKGILD EIESGGPSAM VKYWNDPEVL QKIGQAMSIN FPGDAATSTT LSGPEETEED
201: GGDDDESIVH HTASVGDAEG LKKALEDGAD MDEEDAEGRR ALHFACGYGE LKCAEILLEA GAAVNALDKN KNTPLHYAAG YGRKECVDLL LKHGAAVTPQ
301: NLDGKTPIEV AKLNNQDEVL KVLEMDAFL

Best Arabidopsis Sequence Match ( AT2G17390.1 )
(BLAST)

001: MASSSEKTPL IPSDEKNDTK EESKSTTKPE SGSGAPPSPS PTDPGLDFNA FDFSGMAGIL NDPSIKELAE QIAKDPSFNQ LAEQLQRSVP TGSHEGGLPN
101: FDPQQYMQTM QQVMENPEFR TMAERLGNAL VQDPQMSPFL EALGNPAASE QFAERMAQMK EDPELKPILA EIDAGGPSAM MKYWNDKDVL AKLGEAMGIA
201: VGADQTVAAE PEEAEEGEEE ESIVHQTASL GDVEGLKAAL ASGGNKDEED SEGRTALHFA CGYGEVRCAQ VLLDAGANAN AIDKNKNTPL HYAAGYGRKE
301: CVSLLLENGA AVTQQNMDNK NPIDVARLNN QLDVVKLLEK DAFL

Arabidopsis Description

AKR2BAnkyrin repeat domain-containing protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q29Q26]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.