Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G539600.2 | Wheat | cytosol | 97.07 | 97.6 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 96.46 | 96.83 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 94.38 | 94.6 |
| Zm00001d037125_P009 | Maize | cytosol | 72.13 | 77.57 |
| Os06t0728600-00 | Rice | plasma membrane | 52.42 | 76.17 |
| EER89004 | Sorghum | cytosol | 71.67 | 75.94 |
| Zm00001d014862_P002 | Maize | cytosol | 70.44 | 75.56 |
| KRH74100 | Soybean | cytosol | 5.85 | 57.14 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 33.41 | 47.69 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 36.03 | 43.62 |
| KRH14013 | Soybean | endoplasmic reticulum | 34.33 | 43.01 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 32.64 | 42.15 |
| Solyc02g082540.2.1 | Tomato | nucleus | 33.56 | 41.92 |
| KRH74101 | Soybean | endoplasmic reticulum | 27.25 | 41.26 |
| Solyc02g082530.1.1 | Tomato | nucleus | 3.08 | 41.24 |
| CDX96625 | Canola | cytosol | 30.48 | 40.41 |
| KRH60909 | Soybean | endoplasmic reticulum | 33.03 | 40.4 |
| CDY38814 | Canola | cytosol | 35.33 | 40.12 |
| CDY08192 | Canola | cytosol | 35.64 | 39.81 |
| KRH51589 | Soybean | endoplasmic reticulum | 32.87 | 39.68 |
| CDY04654 | Canola | cytosol | 35.87 | 39.59 |
| Bra025842.1-P | Field mustard | cytosol | 30.48 | 39.48 |
| CDY00394 | Canola | cytosol | 34.56 | 39.25 |
| CDY29508 | Canola | cytosol | 29.95 | 39.17 |
| CDY31869 | Canola | cytosol | 29.87 | 39.15 |
| CDY33644 | Canola | cytosol | 29.95 | 39.13 |
| CDY66337 | Canola | cytosol | 29.79 | 39.09 |
| CDY01356 | Canola | cytosol | 29.41 | 38.98 |
| PGSC0003DMT400025666 | Potato | cytosol | 4.85 | 38.89 |
| Bra012247.1-P | Field mustard | cytosol | 29.87 | 38.8 |
| AT1G20760.1 | Thale cress | cytosol | 30.33 | 38.67 |
| Bra012288.1-P | Field mustard | cytosol | 33.56 | 38.48 |
| CDY01320 | Canola | cytosol | 34.87 | 38.36 |
| CDX96582 | Canola | cytosol | 33.72 | 38.32 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 31.64 | 38.16 |
| Bra016413.1-P | Field mustard | cytosol | 33.49 | 38.16 |
| AT1G21630.2 | Thale cress | cytosol | 35.72 | 37.21 |
| Bra017933.1-P | Field mustard | cytosol | 33.41 | 35.2 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 29.87 | 34.19 |
| Solyc04g082560.2.1 | Tomato | cytosol | 30.95 | 32.74 |
| TraesCS6B01G159700.1 | Wheat | cytosol | 7.54 | 17.92 |
| TraesCS7B01G340200.2 | Wheat | cytosol | 7.39 | 17.61 |
| TraesCS2B01G572600.1 | Wheat | cytosol | 7.16 | 17.03 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| InterPro:EH_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | InterPro:IPR000261 |
| InterPro:IPR002048 | PFAM:PF12763 | PFAM:PF13202 | ScanProsite:PS00018 | PFscan:PS50031 | PFscan:PS50222 |
| PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 | SMART:SM00054 | SUPFAM:SSF47473 | EnsemblPlantsGene:TraesCS7B01G476800 |
| EnsemblPlants:TraesCS7B01G476800.3 | TIGR:cd00052 | TIGR:cd00890 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7B:-:732650222..732658449
Molecular Weight (calculated)
139632.0 Da
IEP (calculated)
5.196
GRAVY (calculated)
-0.770
Length
1299 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEAAFDAYFR AADLDRDGRI SGQEAVAFFK GSGLPQPVLA QIWTYADKNR TGFLGREDFF NSLKLVTVAQ SGRQLTPDIV KSALFGPAAA KIPAPRINIP
0101: TAAPQPNSVA SPPQPTQALG PRQQTPVVNG SQGPPGSSLN LQVPQSGNLV RPPQPPSANT PQVPQQGHPV RPPQPPSANT PQVPQPGHPV RPPQPPNANI
0201: PPAQGIAPRP PVGGGLSGLN QAGSTTANLS TDWFSGKKSA SPLGGTSQAP VRGASPQVNL GTVGIPTQSS TPAAQTPAIT TSVKPNPTDL NILSSQPAVN
0301: DSKALVPLGN GSPSNSSFGV DPFSATPQPT QNSSSPHVSN GLHGSTALGP AAGPHHPPKP MPPGPVQGIS SLLSHTGQVP PNQPAPKQNQ FNSIPSTPGP
0401: LNANIPGGQI PTNQKQFQAP WPKITQADVR KYMIVFIKVD RDRDGKITGE EARNLFLSWR LPREILRKVW DLSDQDKDGM LSFKEFCFAV YLMERFREQR
0501: PLPDVLPDGI WAEGISLPST GQFAENPSGP APNQSAGFAS RAMQGPHPGM PPSSVKQQHR RPLHFDDDTM PTEPQKPKVP ALEKHLVGQL SKEEQNALEA
0601: KFKEASDADK KVQELEKEIL DSREKTDYYR TKMQELILYK SRCDNRFNEV SESMSADKRE VQSLSAKYDE RCKKVGDVAS KLSMDEATFR EIQAKKLEIY
0701: NSIVKLQKGD GDDDKLQERA NQIQSELEEL VKSLNEQCKR YGLRAKPTTL VELPFGWQPG IQETAAVWDE EWDRFAEDGF SIIKELTVEV EPPAVKESHP
0801: AVEDGKVSSN GVSTATTTEK EDNKSDKTAA AEQAVEPEAT GSNGKAESAK NPPVSPVKKA TDGHTNEPDK KPSGTNADSP RAADSMSNDG ASDSPVRGDK
0901: ANNRHSWGPS FDHGDDNDSL WNFGDKDGEN GGDSDLFFGP GGLPPIRTGG STSASAFGKE QKPMFDSVPG TPMEKPFFDS VPGTPLQKSV FDYSVPSTPM
1001: QNSSFDYSVP STPMQKSLFD SSVPSTPMQR SLFDSSVPST PMQKSLFDSS VPSTPMGNSF YDSFPSTPMQ GSLFDSGPGR VESPTAGSTY GGGQQKGFFD
1101: SSVPSTPMYN SSFSPRYSEA GDDSSFDTFS QMDSFGAKDS SSFGQPRDSF SRFDSFGSSA ELGGSNDAFG RFDSFRSNAD QGGGSSFMRY DSMSSNADQG
1201: TGNNNSFMRY DSMSSNADQG GGNNNNSFMR YDSMSSNADH DRSNVFARFD SMKSTDSHDR GYSFDDDDDP FGTGPFKPSK PSTETSSPTR HGTDKWSAF
0101: TAAPQPNSVA SPPQPTQALG PRQQTPVVNG SQGPPGSSLN LQVPQSGNLV RPPQPPSANT PQVPQQGHPV RPPQPPSANT PQVPQPGHPV RPPQPPNANI
0201: PPAQGIAPRP PVGGGLSGLN QAGSTTANLS TDWFSGKKSA SPLGGTSQAP VRGASPQVNL GTVGIPTQSS TPAAQTPAIT TSVKPNPTDL NILSSQPAVN
0301: DSKALVPLGN GSPSNSSFGV DPFSATPQPT QNSSSPHVSN GLHGSTALGP AAGPHHPPKP MPPGPVQGIS SLLSHTGQVP PNQPAPKQNQ FNSIPSTPGP
0401: LNANIPGGQI PTNQKQFQAP WPKITQADVR KYMIVFIKVD RDRDGKITGE EARNLFLSWR LPREILRKVW DLSDQDKDGM LSFKEFCFAV YLMERFREQR
0501: PLPDVLPDGI WAEGISLPST GQFAENPSGP APNQSAGFAS RAMQGPHPGM PPSSVKQQHR RPLHFDDDTM PTEPQKPKVP ALEKHLVGQL SKEEQNALEA
0601: KFKEASDADK KVQELEKEIL DSREKTDYYR TKMQELILYK SRCDNRFNEV SESMSADKRE VQSLSAKYDE RCKKVGDVAS KLSMDEATFR EIQAKKLEIY
0701: NSIVKLQKGD GDDDKLQERA NQIQSELEEL VKSLNEQCKR YGLRAKPTTL VELPFGWQPG IQETAAVWDE EWDRFAEDGF SIIKELTVEV EPPAVKESHP
0801: AVEDGKVSSN GVSTATTTEK EDNKSDKTAA AEQAVEPEAT GSNGKAESAK NPPVSPVKKA TDGHTNEPDK KPSGTNADSP RAADSMSNDG ASDSPVRGDK
0901: ANNRHSWGPS FDHGDDNDSL WNFGDKDGEN GGDSDLFFGP GGLPPIRTGG STSASAFGKE QKPMFDSVPG TPMEKPFFDS VPGTPLQKSV FDYSVPSTPM
1001: QNSSFDYSVP STPMQKSLFD SSVPSTPMQR SLFDSSVPST PMQKSLFDSS VPSTPMGNSF YDSFPSTPMQ GSLFDSGPGR VESPTAGSTY GGGQQKGFFD
1101: SSVPSTPMYN SSFSPRYSEA GDDSSFDTFS QMDSFGAKDS SSFGQPRDSF SRFDSFGSSA ELGGSNDAFG RFDSFRSNAD QGGGSSFMRY DSMSSNADQG
1201: TGNNNSFMRY DSMSSNADQG GGNNNNSFMR YDSMSSNADH DRSNVFARFD SMKSTDSHDR GYSFDDDDDP FGTGPFKPSK PSTETSSPTR HGTDKWSAF
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.