Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01320 | Canola | cytosol | 97.35 | 93.4 |
| Bra016413.1-P | Field mustard | cytosol | 84.29 | 83.77 |
| AT1G21630.2 | Thale cress | cytosol | 85.17 | 77.39 |
| Bra017933.1-P | Field mustard | cytosol | 79.26 | 72.83 |
| KRH74100 | Soybean | cytosol | 7.5 | 63.91 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 40.87 | 50.88 |
| Solyc02g082540.2.1 | Tomato | nucleus | 40.95 | 44.62 |
| Bra025842.1-P | Field mustard | cytosol | 36.63 | 41.38 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 34.51 | 41.07 |
| Bra012247.1-P | Field mustard | cytosol | 35.66 | 40.4 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 38.04 | 40.17 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 33.27 | 39.81 |
| Os03t0130500-01 | Rice | plasma membrane | 34.95 | 37.08 |
| Os06t0728600-00 | Rice | plasma membrane | 29.21 | 37.02 |
| EER92924 | Sorghum | cytosol | 33.63 | 36.46 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 34.07 | 35.84 |
| Zm00001d014862_P002 | Maize | cytosol | 38.31 | 35.84 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 34.16 | 35.7 |
| EER89004 | Sorghum | cytosol | 38.57 | 35.64 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 34.16 | 35.54 |
| Zm00001d037125_P009 | Maize | cytosol | 37.78 | 35.43 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 34.86 | 34.8 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 38.84 | 34.06 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 33.89 | 33.95 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 38.75 | 33.93 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 38.48 | 33.56 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 37.33 | 32.64 |
| Zm00001d027503_P036 | Maize | cytosol | 29.74 | 31.76 |
| Zm00001d048338_P035 | Maize | cytosol | 30.36 | 31.71 |
| Bra035794.1-P | Field mustard | cytosol | 9.8 | 21.14 |
| Bra038259.1-P | Field mustard | cytosol | 9.53 | 18.95 |
| Bra029477.1-P | Field mustard | cytosol | 9.0 | 18.68 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | EnsemblPlantsGene:Bra012288 | EnsemblPlants:Bra012288.1 | EnsemblPlants:Bra012288.1-P | ncoils:Coil |
| InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005515 | InterPro:IPR000261 | InterPro:IPR002048 | UniProt:M4D728 | PFAM:PF12763 | PFAM:PF13202 |
| PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 | SMART:SM00054 |
| SUPFAM:SSF47473 | UniParc:UPI0002541510 | SEG:seg | : | : | : |
Description
AT1G21630 (E=0.0) | calcium-binding EF hand family protein
Coordinates
chrA07:-:8791349..8796848
Molecular Weight (calculated)
122265.0 Da
IEP (calculated)
5.095
GRAVY (calculated)
-0.703
Length
1133 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAPRPTGSQ DLFDTYFRRA DLDGDGRISG AEAVAFFQAS NLPKNVLAQV WSYADAKKAG YLGRAEFYNA LKLVTVAQSR RELTPEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVVP ATQAQGATSM PSSVAAGMRG GQMGGTVSTS NQQVVPGQQN QFNGPRPAQP PQNFQSQGLP AGGAGAGAPR TAPNSVANHI
0201: PTPHMTPAVI SSTTARPQES APVHKPQDSS APSGARALDV PSSQLVGKDP KELAASGNGF ASDSLFGDVF AVASTEPKQL TTGTTSTVAI SSVSSGTVVA
0301: PGVAQSVVRQ SSIPQHGSLG KNPVGVQNQL AGQISQPFAP SGAASGTTGS TVGVGMSASS QMTQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN
0401: LFFSWKLPQE ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP VFPSTIISSE SMFTSPGQSV APHGNASWGH PHVGAQHHQL HGGSRPPAIP
0501: KGKPPRPVPL SPSEGMVQPT QPKRKMPELE KHLVDELEKE IADSKQKIEF FHAKMQELVL YKSRCDNRYN EITERVSGDK RELESLAKKY EEKYKKSGNV
0601: GSKLTIEEAT FRDIQEKKME LYQAIVKFEE GKLDDGVVKE RTEHIQSGLE ELIRNLNERC KQYGVRGKPT TLVELPYGWQ PGIQEGSADW DEEWDKLEEE
0701: GFVFVKELTL DVQNVIAPPK EKSSAWKKEI TASSNEGEDI SSSDVESKTE KKPSSDEEAS EKDPASADGK NDRNGSLDDP DARKGIEADD SPRTKDTRSE
0801: NGHDDGESTA SAGKTLNYDS HDETDSVSSF NGKDKDHEKH DSGFGFGFGF DDFSIKPIKT GSTLSNDFLP PKLSIFSDSV PSPSANANDG FTAKPSLFAD
0901: SVPSTPATTT ASYSGNKSYF DDSVPSTPAY AGKSFFDDSV PSTPAYPGNM FPEKKSFFDD SVQSTPAYST SDLGGKPFAS ETPRSDNLFP GRSPFMFDSV
1001: PSTPAAQDDF SSNTFSRFDS FNSNNNDAFS LSRSDSMRST SEPDPFASRF DSFNYQRYDS FNAQSYDSSS NNYAAETPKA SLTRFDSIGS TRDADYSHGF
1101: GFDDHDPFGS TGPFKTTTNT AETPRSSDHW NAF
0101: PAPKINLAAT PSPQPRGVVP ATQAQGATSM PSSVAAGMRG GQMGGTVSTS NQQVVPGQQN QFNGPRPAQP PQNFQSQGLP AGGAGAGAPR TAPNSVANHI
0201: PTPHMTPAVI SSTTARPQES APVHKPQDSS APSGARALDV PSSQLVGKDP KELAASGNGF ASDSLFGDVF AVASTEPKQL TTGTTSTVAI SSVSSGTVVA
0301: PGVAQSVVRQ SSIPQHGSLG KNPVGVQNQL AGQISQPFAP SGAASGTTGS TVGVGMSASS QMTQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN
0401: LFFSWKLPQE ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP VFPSTIISSE SMFTSPGQSV APHGNASWGH PHVGAQHHQL HGGSRPPAIP
0501: KGKPPRPVPL SPSEGMVQPT QPKRKMPELE KHLVDELEKE IADSKQKIEF FHAKMQELVL YKSRCDNRYN EITERVSGDK RELESLAKKY EEKYKKSGNV
0601: GSKLTIEEAT FRDIQEKKME LYQAIVKFEE GKLDDGVVKE RTEHIQSGLE ELIRNLNERC KQYGVRGKPT TLVELPYGWQ PGIQEGSADW DEEWDKLEEE
0701: GFVFVKELTL DVQNVIAPPK EKSSAWKKEI TASSNEGEDI SSSDVESKTE KKPSSDEEAS EKDPASADGK NDRNGSLDDP DARKGIEADD SPRTKDTRSE
0801: NGHDDGESTA SAGKTLNYDS HDETDSVSSF NGKDKDHEKH DSGFGFGFGF DDFSIKPIKT GSTLSNDFLP PKLSIFSDSV PSPSANANDG FTAKPSLFAD
0901: SVPSTPATTT ASYSGNKSYF DDSVPSTPAY AGKSFFDDSV PSTPAYPGNM FPEKKSFFDD SVQSTPAYST SDLGGKPFAS ETPRSDNLFP GRSPFMFDSV
1001: PSTPAAQDDF SSNTFSRFDS FNSNNNDAFS LSRSDSMRST SEPDPFASRF DSFNYQRYDS FNAQSYDSSS NNYAAETPKA SLTRFDSIGS TRDADYSHGF
1101: GFDDHDPFGS TGPFKTTTNT AETPRSSDHW NAF
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.