Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89004 | Sorghum | cytosol | 91.25 | 90.13 |
| Zm00001d037125_P009 | Maize | cytosol | 84.48 | 84.69 |
| Os06t0728600-00 | Rice | plasma membrane | 54.17 | 73.38 |
| TraesCS7B01G476800.3 | Wheat | cytosol | 75.56 | 70.44 |
| TraesCS7D01G539600.2 | Wheat | cytosol | 75.14 | 70.43 |
| TraesCS7A01G553100.1 | Wheat | cytosol | 74.81 | 70.02 |
| HORVU7Hr1G121230.4 | Barley | cytosol | 73.91 | 69.06 |
| KRH74100 | Soybean | cytosol | 6.28 | 57.14 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 35.26 | 46.92 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 38.32 | 43.24 |
| KRH14013 | Soybean | endoplasmic reticulum | 36.25 | 42.33 |
| Solyc02g082540.2.1 | Tomato | nucleus | 36.0 | 41.92 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 34.68 | 41.75 |
| CDX96625 | Canola | cytosol | 33.2 | 41.02 |
| KRH60909 | Soybean | endoplasmic reticulum | 35.34 | 40.3 |
| KRH74101 | Soybean | endoplasmic reticulum | 28.49 | 40.21 |
| KRH51589 | Soybean | endoplasmic reticulum | 35.26 | 39.68 |
| CDY33644 | Canola | cytosol | 32.45 | 39.54 |
| CDY38814 | Canola | cytosol | 37.16 | 39.34 |
| CDY08192 | Canola | cytosol | 37.74 | 39.29 |
| CDY01356 | Canola | cytosol | 31.71 | 39.18 |
| Bra012247.1-P | Field mustard | cytosol | 32.29 | 39.1 |
| CDY04654 | Canola | cytosol | 37.9 | 39.0 |
| CDY00394 | Canola | cytosol | 36.83 | 38.99 |
| CDY31869 | Canola | cytosol | 31.87 | 38.95 |
| CDY66337 | Canola | cytosol | 31.79 | 38.89 |
| Bra025842.1-P | Field mustard | cytosol | 32.2 | 38.88 |
| AT1G20760.1 | Thale cress | cytosol | 32.7 | 38.86 |
| CDY29508 | Canola | cytosol | 31.79 | 38.77 |
| Bra012288.1-P | Field mustard | cytosol | 35.84 | 38.31 |
| PGSC0003DMT400025666 | Potato | cytosol | 5.12 | 38.27 |
| CDY01320 | Canola | cytosol | 37.16 | 38.1 |
| Bra016413.1-P | Field mustard | cytosol | 35.51 | 37.72 |
| CDX96582 | Canola | cytosol | 35.59 | 37.71 |
| AT1G21630.2 | Thale cress | cytosol | 38.73 | 37.61 |
| Solyc02g082530.1.1 | Tomato | nucleus | 2.97 | 37.11 |
| Bra017933.1-P | Field mustard | cytosol | 35.51 | 34.87 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 32.37 | 34.54 |
| Zm00001d027503_P036 | Maize | cytosol | 28.57 | 32.61 |
| Zm00001d048338_P035 | Maize | cytosol | 29.07 | 32.44 |
| Solyc04g082560.2.1 | Tomato | cytosol | 32.2 | 31.76 |
| Zm00001d014526_P002 | Maize | cytosol | 8.18 | 18.1 |
| Zm00001d053858_P001 | Maize | cytosol, extracellular | 7.76 | 17.18 |
| Zm00001d001906_P004 | Maize | cytosol | 7.02 | 13.36 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100193029 | MapMan:22.1.4.7 | UniProt:A0A1D6GWT6 | ProteinID:AQK67330.1 | ncoils:Coil |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005515 | InterPro:IPR000261 | InterPro:IPR002048 | PFAM:PF12763 | PFAM:PF13202 |
| ScanProsite:PS00018 | PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0008455CB9 | EnsemblPlantsGene:Zm00001d014862 | EnsemblPlants:Zm00001d014862_P002 | EnsemblPlants:Zm00001d014862_T002 |
| SEG:seg | : | : | : | : | : |
Description
Calcium-binding EF hand family protein
Coordinates
chr5:+:66015113..66024160
Molecular Weight (calculated)
131688.0 Da
IEP (calculated)
5.401
GRAVY (calculated)
-0.716
Length
1211 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEAAFDAYFR AADLDRDGRI SGQEAVAFFK GSGLPQPVLA QIWTYADKNR SGFLGREDFF NALKLVTVAQ SGRELTPDIV RSALFGPAAA KIPAPRINVS
0101: TAAPQASSVA NLPNATQAPG PVQQTPVVRG TQGLPGISSN PQVRPPQPPN ANTAPPAHGQ GVASRPPVGS GPTGINHTSS TTPSLATDWF SGKRSASPLG
0201: ATSQTPTRGI SPQANLSSAG ISVQNSAPVP GYNSHTPGVN AISTNLNVMS SQPSVNDSKA LVPLGNGLSS NSTFGADPFS ATPRPEQGSP FPPNVPNNLL
0301: SSTPPASAAG HHHPPKPMQA GPVQSISSLS PHTSQLPHNQ PPPRQQQFNA TPSAPGPVSS NIPTGQIPSS PSQPQAPWPK ITQVDVRKYM IVFIKVDRDR
0401: DGKITGEEAR NLFLSWRLPR DVLRKVWDLS DQDKDGMLSF KEFCIAVYLM ERHREHRPLP DTVTDAIWAE GTALPSTGQF AENPSAPAPQ ASAGYTSRTM
0501: QGPHHGMLPS SMKPPSRRPL PLDADDTIKP EQQKPKVPVL EEHLVGQLSK EEQDTLDAKF NEASVADKKV YPSLVLFQLS RAFMSYEKVQ ELEKEILDSR
0601: EKTEFYRTKM QELILYKSRC DNRFNEVSES MSADKREVQS LSAKYDERCK KVGDVASKLT MDEATFREIQ EKKLEIYNAI VKLQKGDDSD EKFQERANKI
0701: QSDLEELVKS LNEQCKRYGL RAKPTTLVEL PFGWQPGIQE TAYAWDEEWD NFGDEGFSII KELTVEVEPP VVAKSQPTED VKASSNGAST EKEDNKGDKS
0801: AAAVEQVVKP ETAPSNIKPE SAKSPPVSPV KNKEDGPDEH DKKQSGTNDV SPRESISNRG AMDSPTHGDK THDGHSWGMD NDSLWNFDHK EGENGDSDLF
0901: FGPQGLPPIR TGGSSSGNSV VKEQKPFFDS VPGTPVEKSV FDSIPGTPVQ KSVFDYSVPS TPMQNSVFDY SVPSTPMQKS LFDSVPGTPV QRSVFDSVPS
1001: TPMQRSVFDS VPSTPTQKPF FDSFPSTPMQ RSLFDSGPSR AESPTASSMY GKEQKGFFDS SVPSTPMYNS SFTPRYSEAG DDSFDTMSQY SSFGMHESNS
1101: FGQRDSLSRF DSFSSNADNG GNDTFARFDS FRSTSDQGGG NSFMRYDSMN SSSDHDGIGT FARFDSMKSS NYNSRGYSFD DEDPFGTGPF KSTETTSHSP
1201: TKHGTDTWSA F
0101: TAAPQASSVA NLPNATQAPG PVQQTPVVRG TQGLPGISSN PQVRPPQPPN ANTAPPAHGQ GVASRPPVGS GPTGINHTSS TTPSLATDWF SGKRSASPLG
0201: ATSQTPTRGI SPQANLSSAG ISVQNSAPVP GYNSHTPGVN AISTNLNVMS SQPSVNDSKA LVPLGNGLSS NSTFGADPFS ATPRPEQGSP FPPNVPNNLL
0301: SSTPPASAAG HHHPPKPMQA GPVQSISSLS PHTSQLPHNQ PPPRQQQFNA TPSAPGPVSS NIPTGQIPSS PSQPQAPWPK ITQVDVRKYM IVFIKVDRDR
0401: DGKITGEEAR NLFLSWRLPR DVLRKVWDLS DQDKDGMLSF KEFCIAVYLM ERHREHRPLP DTVTDAIWAE GTALPSTGQF AENPSAPAPQ ASAGYTSRTM
0501: QGPHHGMLPS SMKPPSRRPL PLDADDTIKP EQQKPKVPVL EEHLVGQLSK EEQDTLDAKF NEASVADKKV YPSLVLFQLS RAFMSYEKVQ ELEKEILDSR
0601: EKTEFYRTKM QELILYKSRC DNRFNEVSES MSADKREVQS LSAKYDERCK KVGDVASKLT MDEATFREIQ EKKLEIYNAI VKLQKGDDSD EKFQERANKI
0701: QSDLEELVKS LNEQCKRYGL RAKPTTLVEL PFGWQPGIQE TAYAWDEEWD NFGDEGFSII KELTVEVEPP VVAKSQPTED VKASSNGAST EKEDNKGDKS
0801: AAAVEQVVKP ETAPSNIKPE SAKSPPVSPV KNKEDGPDEH DKKQSGTNDV SPRESISNRG AMDSPTHGDK THDGHSWGMD NDSLWNFDHK EGENGDSDLF
0901: FGPQGLPPIR TGGSSSGNSV VKEQKPFFDS VPGTPVEKSV FDSIPGTPVQ KSVFDYSVPS TPMQNSVFDY SVPSTPMQKS LFDSVPGTPV QRSVFDSVPS
1001: TPMQRSVFDS VPSTPTQKPF FDSFPSTPMQ RSLFDSGPSR AESPTASSMY GKEQKGFFDS SVPSTPMYNS SFTPRYSEAG DDSFDTMSQY SSFGMHESNS
1101: FGQRDSLSRF DSFSSNADNG GNDTFARFDS FRSTSDQGGG NSFMRYDSMN SSSDHDGIGT FARFDSMKSS NYNSRGYSFD DEDPFGTGPF KSTETTSHSP
1201: TKHGTDTWSA F
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.