Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU90466 | Sorghum | cytosol, peroxisome, plasma membrane | 90.99 | 95.45 |
| HORVU2Hr1G018720.2 | Barley | peroxisome | 78.56 | 86.34 |
| PGSC0003DMT400071541 | Potato | cytosol, peroxisome, plastid | 5.7 | 86.21 |
| TraesCS2B01G127700.1 | Wheat | peroxisome | 81.87 | 86.19 |
| TraesCS2A01G109700.1 | Wheat | golgi | 81.76 | 86.07 |
| TraesCS2D01G109900.1 | Wheat | golgi, unclear | 81.53 | 85.83 |
| Os07t0675000-02 | Rice | nucleus | 80.62 | 85.08 |
| VIT_05s0077g01940.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 66.93 | 71.59 |
| GSMUA_Achr8P30030_001 | Banana | cytosol | 69.56 | 71.51 |
| Solyc05g054370.2.1 | Tomato | nucleus | 66.02 | 69.84 |
| PGSC0003DMT400060245 | Potato | cytosol | 65.68 | 69.48 |
| Solyc01g066310.2.1 | Tomato | nucleus | 65.11 | 68.96 |
| Bra029606.1-P | Field mustard | cytosol | 64.42 | 68.9 |
| CDY24664 | Canola | peroxisome | 64.31 | 68.78 |
| CDY05294 | Canola | cytosol | 64.08 | 68.62 |
| KRH12085 | Soybean | nucleus | 64.77 | 68.6 |
| AT3G06810.1 | Thale cress | peroxisome | 64.31 | 68.45 |
| KRH37066 | Soybean | endoplasmic reticulum, nucleus | 58.61 | 67.63 |
| CDY34928 | Canola | extracellular | 8.32 | 57.03 |
| Zm00001d035475_P001 | Maize | mitochondrion | 9.46 | 21.28 |
| Zm00001d010970_P003 | Maize | cytosol, peroxisome, plasma membrane | 9.92 | 15.56 |
| Zm00001d037521_P002 | Maize | peroxisome | 6.61 | 13.18 |
| Zm00001d039768_P003 | Maize | mitochondrion | 6.73 | 13.08 |
Protein Annotations
| Gene3D:1.10.540.10 | Gene3D:1.20.140.10 | EntrezGene:100502333 | Gene3D:2.40.110.10 | Gene3D:3.30.200.20 | Gene3D:3.90.1200.10 |
| MapMan:5.7.3.3.2 | UniProt:A0A1D6F4C1 | InterPro:Acyl-CoA_Oxase/DH_cen-dom | InterPro:AcylCoA_DH/ox_N | InterPro:AcylCoA_DH/ox_N_sf | InterPro:AcylCoA_DH/oxidase_NM_dom |
| InterPro:AcylCo_DH-like_C | InterPro:AcylCo_DH/oxidase_C | InterPro:Aminoglycoside_PTrfase | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0016049 | GO:GO:0016491 | GO:GO:0016627 | GO:GO:0030154 | GO:GO:0040007 | GO:GO:0048767 |
| GO:GO:0050660 | GO:GO:0055114 | InterPro:IPR037069 | InterPro:Kinase-like_dom_sf | ProteinID:ONM26172.1 | PFAM:PF00441 |
| PFAM:PF01636 | PFAM:PF02770 | PFAM:PF02771 | PANTHER:PTHR10909 | PANTHER:PTHR10909:SF221 | SUPFAM:SSF47203 |
| SUPFAM:SSF56112 | SUPFAM:SSF56645 | UniParc:UPI0008457340 | EnsemblPlantsGene:Zm00001d007158 | EnsemblPlants:Zm00001d007158_P014 | EnsemblPlants:Zm00001d007158_T014 |
| SEG:seg | : | : | : | : | : |
Description
Probable acyl-CoA dehydrogenase IBR3
Coordinates
chr2:+:223463206..223469222
Molecular Weight (calculated)
97166.3 Da
IEP (calculated)
8.699
GRAVY (calculated)
-0.193
Length
877 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKLTSELLR PVVPAAALDE AALLRYLVAN VPGFPGPAPA LSLTQFGHGQ SNPTYCIHAS APGGGQPRRY VLRKKPPGAI LQSAHAVERE YQVRSGSISI
101: FPPPLFFCGK DANPIVSFLL ITHMGLLQSF PIGKQVLKAL GDHTDVPVPK VYCLCTDASV IGTPFYIMEY LEGIIYPDSA LPGVTPSKRR AIYLSTAKTL
201: AAIHKVDINA IGLQKYGRRD NYCKRQVERW ERQYLASTGE GKPARYQRML DLARWLKEHV PEEDSSPGPG TGLVHGDYRP DNLVFHPTED RVIGVIDWEL
301: STLGNQMCDV AYSCLPYIID AAPSARTSYG GFQDTGIPDG IPQLEEYLSI YCSFAARPWP AANWKFYIAF SLFRGASIYA GVYHRWTMGN ASGGERAKFA
401: GRVANAMIDC AWDFINRVNV LQELPSKGSQ VLGASWQEFH REEESSTSEK NQGKFVPSEK VMQLRKKLIK FIEDHIYPME AEFYKHAQST SRWTIHPEEE
501: NLKALAKKEG LWNLFIPLDS AARARKLLFE DHSQISLGSS NNLLLGAGLT NLEYGYLCEI MGRSVWAPQI FNCGAPDTGN MEVLLRYGTK EQQKQWLVPL
601: LEGTIRSGFA MTEPQVASSD ATNIECSISR QGDFYVINGR KWWTSGAMDP RCKILILMGK TDFSAPKHKQ QSMILVDINT PGVQIKRPLL VFGFDDAPHG
701: HAEITFENVR VPVTNILLGE GRGFEIAQGR LGPGRLHHCM RLVGAAERGM NLMVERALNR TAFGKRIAQH GSFLSDLAKC RIELEQARLL VLEAADQLDR
801: HGNKKARGIL AMAKVAAPNM ALKVLDMAMQ VHGAAGVSSD TVLSHLWATA RTLRIADGPD EVHLGTIAKL ELRRARL
101: FPPPLFFCGK DANPIVSFLL ITHMGLLQSF PIGKQVLKAL GDHTDVPVPK VYCLCTDASV IGTPFYIMEY LEGIIYPDSA LPGVTPSKRR AIYLSTAKTL
201: AAIHKVDINA IGLQKYGRRD NYCKRQVERW ERQYLASTGE GKPARYQRML DLARWLKEHV PEEDSSPGPG TGLVHGDYRP DNLVFHPTED RVIGVIDWEL
301: STLGNQMCDV AYSCLPYIID AAPSARTSYG GFQDTGIPDG IPQLEEYLSI YCSFAARPWP AANWKFYIAF SLFRGASIYA GVYHRWTMGN ASGGERAKFA
401: GRVANAMIDC AWDFINRVNV LQELPSKGSQ VLGASWQEFH REEESSTSEK NQGKFVPSEK VMQLRKKLIK FIEDHIYPME AEFYKHAQST SRWTIHPEEE
501: NLKALAKKEG LWNLFIPLDS AARARKLLFE DHSQISLGSS NNLLLGAGLT NLEYGYLCEI MGRSVWAPQI FNCGAPDTGN MEVLLRYGTK EQQKQWLVPL
601: LEGTIRSGFA MTEPQVASSD ATNIECSISR QGDFYVINGR KWWTSGAMDP RCKILILMGK TDFSAPKHKQ QSMILVDINT PGVQIKRPLL VFGFDDAPHG
701: HAEITFENVR VPVTNILLGE GRGFEIAQGR LGPGRLHHCM RLVGAAERGM NLMVERALNR TAFGKRIAQH GSFLSDLAKC RIELEQARLL VLEAADQLDR
801: HGNKKARGIL AMAKVAAPNM ALKVLDMAMQ VHGAAGVSSD TVLSHLWATA RTLRIADGPD EVHLGTIAKL ELRRARL
001: MGSSTGDLVT RIQSAHRFDH DALFRFAADN VSGFPTNPSQ FKVSQFGHGQ SNPTFLIEVG SGSSLKRYVL RKKPPGKLLQ SAHAVDREFQ VLRALGEHTQ
101: VPVPKVFCLC TDPAVIGTAF YIMEFMEGRI FIDPKLPNVA PERRNAIYRA TAKALASLHS ADVDAIGLEK YGRRGNYCKR QIDRWFKQYL ASTSEGKPER
201: NPKMFELVDW LRKNIPAEDS TGATSGLVHG DFRIDNLVFH PSEDRVIGII DWELSTLGNQ MCDVAYSCMH YIVNVQLDKE HVSEGFETTG LPEGMLSMPE
301: FLLEYCSASG KPWPAANWKF YVAFSLFRAA SIYTGVYSRW LMGNASAGER ARNTGVQANE LVESALGYIA RENVLPEHPP SVQRDVSPSY ESLVDGSGRF
401: IPNRKVLELR QKLIKFMETH IYPMENEFSK LAQSDMRWTV HPQEEKLKEM AKREGLWNLF VPVDSAARAR RELAATENKH NLSGKSFDQL FGEGLTNLEY
501: GYLCEIMGRS VWAPQVFNCG APDTGNMEVI LRYGNKEQIS EWLIPLLEGR IRSGFAMTEP QVASSDATNI ECSIRRQGDS YVINGTKWWT SGAMDPRCRV
601: LILMGKTDFN APKHKQQSMI LVDMRTPGIS VKRPLTVFGF DDAPHGHAEI SFENVVVPAK NILLGEGRGF EIAQGRLGPG RLHHCMRLIG AAERGMELMA
701: QRALSRKTFG KFIAQHGSFV SDLAKLRVEL EGTRLLVLEA ADHLDKFGNK KARGILAMAK VAAPNMALKV LDTAIQVHGA AGVSSDTVLA HLWATARTLR
801: IADGPDEVHL GTIGKLELQR ASKL
101: VPVPKVFCLC TDPAVIGTAF YIMEFMEGRI FIDPKLPNVA PERRNAIYRA TAKALASLHS ADVDAIGLEK YGRRGNYCKR QIDRWFKQYL ASTSEGKPER
201: NPKMFELVDW LRKNIPAEDS TGATSGLVHG DFRIDNLVFH PSEDRVIGII DWELSTLGNQ MCDVAYSCMH YIVNVQLDKE HVSEGFETTG LPEGMLSMPE
301: FLLEYCSASG KPWPAANWKF YVAFSLFRAA SIYTGVYSRW LMGNASAGER ARNTGVQANE LVESALGYIA RENVLPEHPP SVQRDVSPSY ESLVDGSGRF
401: IPNRKVLELR QKLIKFMETH IYPMENEFSK LAQSDMRWTV HPQEEKLKEM AKREGLWNLF VPVDSAARAR RELAATENKH NLSGKSFDQL FGEGLTNLEY
501: GYLCEIMGRS VWAPQVFNCG APDTGNMEVI LRYGNKEQIS EWLIPLLEGR IRSGFAMTEP QVASSDATNI ECSIRRQGDS YVINGTKWWT SGAMDPRCRV
601: LILMGKTDFN APKHKQQSMI LVDMRTPGIS VKRPLTVFGF DDAPHGHAEI SFENVVVPAK NILLGEGRGF EIAQGRLGPG RLHHCMRLIG AAERGMELMA
701: QRALSRKTFG KFIAQHGSFV SDLAKLRVEL EGTRLLVLEA ADHLDKFGNK KARGILAMAK VAAPNMALKV LDTAIQVHGA AGVSSDTVLA HLWATARTLR
801: IADGPDEVHL GTIGKLELQR ASKL
Arabidopsis Description
IBR3Probable acyl-CoA dehydrogenase IBR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ3]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.