CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029606.1-P	Field mustard	cytosol	98.9	98.9
CDY05294	Canola	cytosol	97.93	98.05
AT3G06810.1	Thale cress	peroxisome	93.41	92.96
PGSC0003DMT400071541	Potato	cytosol, peroxisome, plastid	6.1	86.21
VIT_05s0077g01940.t01	Wine grape	cytosol, mitochondrion, peroxisome	75.37	75.37
KRH12085	Soybean	nucleus	74.63	73.91
KRH37066	Soybean	endoplasmic reticulum, nucleus	67.8	73.16
Solyc01g066310.2.1	Tomato	nucleus	71.83	71.14
PGSC0003DMT400060245	Potato	cytosol	71.59	70.81
Solyc05g054370.2.1	Tomato	nucleus	71.34	70.57
HORVU2Hr1G018720.2	Barley	peroxisome	67.93	69.8
TraesCS2B01G127700.1	Wheat	peroxisome	70.0	68.91
TraesCS2A01G109700.1	Wheat	golgi	70.0	68.91
TraesCS2D01G109900.1	Wheat	golgi, unclear	69.88	68.79
Os07t0675000-02	Rice	nucleus	69.63	68.71
GSMUA_Achr8P30030_001	Banana	cytosol	71.1	68.35
OQU90466	Sorghum	cytosol, peroxisome, plasma membrane	69.27	67.94
Zm00001d007158_P014	Maize	peroxisome, plasma membrane	68.78	64.31
CDY34928	Canola	extracellular	9.63	61.72
CDY53838	Canola	mitochondrion	9.39	18.83
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	9.76	17.24
CDX78043	Canola	peroxisome	7.32	13.67
CDY23164	Canola	peroxisome	7.2	13.44
CDX95301	Canola	peroxisome	7.2	13.44
CDX73688	Canola	peroxisome	7.2	13.44
CDY64742	Canola	cytosol, mitochondrion, plastid	2.32	10.98
CDY59727	Canola	extracellular, peroxisome, plastid	1.46	9.38
CDY59726	Canola	cytosol	0.98	9.3
CDX73320	Canola	plastid	2.68	9.17

Protein Annotations

Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	Gene3D:3.30.200.20	Gene3D:3.90.1200.10	MapMan:5.7.3.3.2
GO:A0A078GH93	UniProt:A0A078GH93	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom
InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	InterPro:Aminoglycoside_PTrfase	EnsemblPlants:CDY24664	ProteinID:CDY24664	ProteinID:CDY24664.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00027041001	InterPro:IPR037069	InterPro:Kinase-like_dom_sf
PFAM:PF00441	PFAM:PF01636	PFAM:PF02770	PFAM:PF02771	PANTHER:PTHR10909	PANTHER:PTHR10909:SF282
SUPFAM:SSF47203	SUPFAM:SSF56112	SUPFAM:SSF56645	UniParc:UPI0004EF07B2	SEG:seg	:

Description

BnaA05g30630DBnaA05g30630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GH93]

Coordinates

chrLK032162:-:255879..260413

Molecular Weight (calculated)

91105.7 Da

IEP (calculated)

8.253

GRAVY (calculated)

-0.200

Length

820 amino acids

Sequence
(BLAST)

001: MGSNTGDLVT RVQSAHLFDH DALFRYAADN VSGFPTNPSQ FTISQFGHGQ SNPTFLIAVG SGSSIKRYVL RKKPPGKLLQ SAHAVEREFQ VLKALGEHTQ
101: VPVPKVFCLC TDPSVIGTAF YIMEFMEGRI FIDPKLPNVA PERRTAIYRA AAKALASLHS ADVDTIGLDK YGRRANYCQR QIDRWFKQYL ASTSEGKPVR
201: NPKMFELVDW LRQSIPAEDS TGATSGLVHG DFRIDNLVFH PYEDRVIGIL DWELSTLGNQ MCDVAYSCMH YIVNVQLDKE HVSEGLETTG LPDGILSMPE
301: FLLEYCSALG KPWPAANWKF YVAFSLFRAA SIYTGVYNRW LMGNASAGER ARNTGVQANE LVECALGYIA RQNVLPAHPP SGKRDVSRPS YESLVDGTGR
401: FVPNRKVLEL RGKLVKFMET HIYPMEKEFS KLAQSDLRWT VHPEEERLKE EAKRQGLWNL FIPVDSAARA RRELAAIENK QSFDQLFGEG LTNLEYGYLC
501: EIMGRSVWAP QVFNCGAPDT GNMEVILRYG NKEQIAEWLI PLLEGKIRSG FAMTEPQVAS SDATNIECSI KRQGDSYVIN GTKWWTSGAM DPRCRVLILM
601: GKTDFNAPKH KQQSMILVDM RTPGIHVKRP LTVFGFDDAP HGHAEISFEN VIVPATNILL GEGRGFEIAQ GRLGPGRLHH CMRLIGAAER GMELMAQRAL
701: SRKTFGVFIA QHGSFVSDLA KLRVELEGTR LLVLEAADHL DKFGNKKARG ILAMAKVAAP NMALKVLDTA IQVHGAAGVC SDTVLAHLWA TARTLRIADG
801: PDEVHLGTIG KLELQRASKL

Best Arabidopsis Sequence Match ( AT3G06810.1 )
(BLAST)

001: MGSSTGDLVT RIQSAHRFDH DALFRFAADN VSGFPTNPSQ FKVSQFGHGQ SNPTFLIEVG SGSSLKRYVL RKKPPGKLLQ SAHAVDREFQ VLRALGEHTQ
101: VPVPKVFCLC TDPAVIGTAF YIMEFMEGRI FIDPKLPNVA PERRNAIYRA TAKALASLHS ADVDAIGLEK YGRRGNYCKR QIDRWFKQYL ASTSEGKPER
201: NPKMFELVDW LRKNIPAEDS TGATSGLVHG DFRIDNLVFH PSEDRVIGII DWELSTLGNQ MCDVAYSCMH YIVNVQLDKE HVSEGFETTG LPEGMLSMPE
301: FLLEYCSASG KPWPAANWKF YVAFSLFRAA SIYTGVYSRW LMGNASAGER ARNTGVQANE LVESALGYIA RENVLPEHPP SVQRDVSPSY ESLVDGSGRF
401: IPNRKVLELR QKLIKFMETH IYPMENEFSK LAQSDMRWTV HPQEEKLKEM AKREGLWNLF VPVDSAARAR RELAATENKH NLSGKSFDQL FGEGLTNLEY
501: GYLCEIMGRS VWAPQVFNCG APDTGNMEVI LRYGNKEQIS EWLIPLLEGR IRSGFAMTEP QVASSDATNI ECSIRRQGDS YVINGTKWWT SGAMDPRCRV
601: LILMGKTDFN APKHKQQSMI LVDMRTPGIS VKRPLTVFGF DDAPHGHAEI SFENVVVPAK NILLGEGRGF EIAQGRLGPG RLHHCMRLIG AAERGMELMA
701: QRALSRKTFG KFIAQHGSFV SDLAKLRVEL EGTRLLVLEA ADHLDKFGNK KARGILAMAK VAAPNMALKV LDTAIQVHGA AGVSSDTVLA HLWATARTLR
801: IADGPDEVHL GTIGKLELQR ASKL

Arabidopsis Description

IBR3Probable acyl-CoA dehydrogenase IBR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ3]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.