CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, extracellular

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, peroxisome, plastid
Any Predictor:	extracellular, nucleus, peroxisome, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64742	Canola	cytosol, mitochondrion, plastid	47.66	35.26
CDX73320	Canola	plastid	43.75	23.33
CDX73688	Canola	peroxisome	45.31	13.21
CDX78043	Canola	peroxisome	45.31	13.21
CDX95301	Canola	peroxisome	42.97	12.53
CDY23164	Canola	peroxisome	42.19	12.3
GSMUA_Achr8P21130_001	Banana	peroxisome	38.28	11.24
Zm00001d037521_P002	Maize	peroxisome	35.94	10.45
Os01t0159400-01	Rice	nucleus	35.16	10.39
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	34.38	10.16
OQU86270	Sorghum	peroxisome	34.38	10.07
OQU77505	Sorghum	peroxisome	33.59	9.84
TraesCS1A01G110300.1	Wheat	peroxisome	33.59	9.84
TraesCS1B01G129300.1	Wheat	peroxisome	33.59	9.84
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	33.59	9.84
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	32.81	9.77
Zm00001d039768_P003	Maize	mitochondrion	34.38	9.76
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	33.59	9.09
CDY53838	Canola	mitochondrion	10.94	3.42
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	10.94	3.02
CDY34928	Canola	extracellular	2.34	2.34
CDY05294	Canola	cytosol	9.38	1.47
CDY24664	Canola	peroxisome	9.38	1.46
CDY59726	Canola	cytosol	0.78	1.16

Protein Annotations

Gene3D:1.10.540.10	MapMan:35.1	GO:A0A078J8J3	UniProt:A0A078J8J3	InterPro:AcylCoA_DH/ox_N_sf	EnsemblPlants:CDY59727
ProteinID:CDY59727	ProteinID:CDY59727.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016627
GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00027633001	InterPro:IPR037069	PANTHER:PTHR43188	TMHMM:TMhelix
UniParc:UPI0004EEA4BE	:	:	:	:	:

Description

BnaA03g59250DBnaA03g59250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8J3]

Coordinates

chrLK033799:-:39568..40539

Molecular Weight (calculated)

14652.1 Da

IEP (calculated)

4.790

GRAVY (calculated)

0.289

Length

128 amino acids

Sequence
(BLAST)

001: MNVSVAFPQA TPASKFPPCT SDYYHFNELL TPEEQAARKR VREFMEKEVA PIMTEVLHSI SFQSLELPFQ ILELYVLLVA LSRVMAVLAS PSQPMPLQQQ
101: RYLELMQAVG LLIWCIPLWA CSLLPVWE

Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)

001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL

Arabidopsis Description

ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.