CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73320	Canola	plastid	31.4	11.25
CDY64742	Canola	cytosol, mitochondrion, plastid	4.65	2.31
GSMUA_Achr8P21130_001	Banana	peroxisome	9.3	1.83
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	9.3	1.83
TraesCS1B01G129300.1	Wheat	peroxisome	9.3	1.83
TraesCS1A01G110300.1	Wheat	peroxisome	9.3	1.83
CDX73688	Canola	peroxisome	9.3	1.82
CDX78043	Canola	peroxisome	9.3	1.82
CDX95301	Canola	peroxisome	9.3	1.82
CDY23164	Canola	peroxisome	9.3	1.82
Zm00001d037521_P002	Maize	peroxisome	9.3	1.82
CDY53838	Canola	mitochondrion	8.14	1.71
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	9.3	1.69
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	8.14	1.63
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	8.14	1.62
Os01t0159400-01	Rice	nucleus	8.14	1.62
OQU86270	Sorghum	peroxisome	8.14	1.6
OQU77505	Sorghum	peroxisome	8.14	1.6
CDY34928	Canola	extracellular	2.33	1.56
Zm00001d039768_P003	Maize	mitochondrion	8.14	1.55
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	8.14	1.51
CDY05294	Canola	cytosol	10.47	1.1
CDY24664	Canola	peroxisome	9.3	0.98
CDY59727	Canola	extracellular, peroxisome, plastid	1.16	0.78

Protein Annotations

EnsemblPlants:CDY59726	EnsemblPlantsGene:GSBRNA2T00027632001	ProteinID:CDY59726	ProteinID:CDY59726.1	UniParc:UPI0004EECDBA	UniProt:A0A078J816
MapMan:35.2	:	:	:	:	:

Description

BnaA03g59240DBnaA03g59240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J816]

Coordinates

chrLK033799:-:37897..39496

Molecular Weight (calculated)

9595.3 Da

IEP (calculated)

3.885

GRAVY (calculated)

-0.022

Length

86 amino acids

Sequence
(BLAST)

1: MHTTCQLPQT VEFLGTGEVV RIETTNGWCL PVDSLPSHVQ LGLSVYQTLA KDNNITDDLE VTLTITYYNQ NATARLDIDL IITDLE

Best Arabidopsis Sequence Match ( AT4G36210.2 )
(BLAST)

001: MVEQEMALAK AADAMVHSIQ CSVSIDAKKE KHQEYENECR EKYAVPEVKS KDVDLDKEKD KKEAAESAAR EGLEAGVVII DGSHKPEVLE NEKSVEEVTL
101: LSHQRKINVL YELLSACLSD KHHEDKKCKR CRKGYDARHR VALRLLATWF NIEWIKVEAI ETMVACSAMA IQKSAEMKGE DNLTPTTSWA KWKRGGIIGA
201: AAITGGTLMA ITGGLAAPAI AAGFGALAPT LGTIIPVIGA GGFAAAASAA GTVAGSVAVA ASFGAAGAGL TGTKMARRIG DLDEFEFKAI GENHNQGRLA
301: VEVLVAGVVF EEEDFVKPWE GLTSNLERYT LQWESKNLIL VSTAIQDWLT SRLAMELMKQ GAMHTVLASL LMALAWPATI LVAADFIDSK WSIAIDRSDK
401: AGRLLAEVLQ KGLQGNRYRF HDCCNEVNII SIFKSYMVAG RFINVYATND WTLGIAFRAS LISQGLAGIQ PICIPGIENV DVTDMVEGHS SYLWKTQQIL
501: ERLEIDTYYP VFRDTL

Arabidopsis Description

Protein of unknown function (DUF726) [Source:TAIR;Acc:AT4G36210]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.