CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64742	Canola	cytosol, mitochondrion, plastid	32.08	44.51
CDY59727	Canola	extracellular, peroxisome, plastid	23.33	43.75
CDY59726	Canola	cytosol	11.25	31.4
CDX78043	Canola	peroxisome	38.75	21.18
CDX73688	Canola	peroxisome	38.75	21.18
CDX95301	Canola	peroxisome	36.67	20.05
CDY23164	Canola	peroxisome	35.83	19.59
GSMUA_Achr8P21130_001	Banana	peroxisome	27.08	14.91
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	25.83	14.32
Zm00001d037521_P002	Maize	peroxisome	26.25	14.32
OQU86270	Sorghum	peroxisome	25.42	13.96
Os01t0159400-01	Rice	nucleus	25.0	13.86
OQU77505	Sorghum	peroxisome	25.0	13.73
TraesCS1A01G110300.1	Wheat	peroxisome	25.0	13.73
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	24.58	13.72
TraesCS1B01G129300.1	Wheat	peroxisome	24.58	13.5
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	24.58	13.5
Zm00001d039768_P003	Maize	mitochondrion	25.0	13.3
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	25.0	12.69
CDY53838	Canola	mitochondrion	9.58	5.62
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	9.58	4.96
CDY24664	Canola	peroxisome	9.17	2.68
CDY05294	Canola	cytosol	8.75	2.56
CDY34928	Canola	extracellular	1.25	2.34

Protein Annotations

Gene3D:1.10.540.10	MapMan:35.1	GO:A0A078C923	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom
EnsemblPlants:CDX73320	ProteinID:CDX73320	ProteinID:CDX73320.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00106427001	InterPro:IPR037069	PFAM:PF02771	PANTHER:PTHR43188	PANTHER:PTHR43188:SF1	SUPFAM:SSF56645
UniParc:UPI0004EF2A95	:	:	:	:	:

Description

BnaC05g27860D

Coordinates

chrLK031798:-:1532136..1540245

Molecular Weight (calculated)

26166.4 Da

IEP (calculated)

5.606

GRAVY (calculated)

0.066

Length

240 amino acids

Sequence
(BLAST)

001: MIKYSGLIPN FSVSSFGNNA EKKVKSSYFD LPAMNVFVAF PQATPASKFP TCTSDYYHFN ELLTPKGQAV RKRVSEFMEK EVAPIMTEYW EKAEFPFHII
101: PKLGALGVVG GSIKGCGCPG LSITANAIAT ADISRVDASC GTFNLVHTSL DMLTIAGMGM HKICQIPQIV EFLGSGEVVR IETSNGWCLP VDSLPSYVHC
201: AITPAQLGIS VYQTLDNNIN DDLEVTLTIT YYNQNATETK

Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)

001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL

Arabidopsis Description

ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.