CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95301	Canola	peroxisome	98.86	98.86
CDX73688	Canola	peroxisome	93.39	93.39
CDX78043	Canola	peroxisome	92.94	92.94
AT3G51840.1	Thale cress	peroxisome	87.02	87.61
KRH49397	Soybean	endoplasmic reticulum	72.21	78.66
Solyc10g085200.1.1	Tomato	peroxisome	74.26	78.18
KRH65710	Soybean	peroxisome	77.45	77.8
KRH00268	Soybean	peroxisome	76.08	76.96
VIT_08s0105g00460.t01	Wine grape	peroxisome	77.9	76.68
GSMUA_Achr8P21130_001	Banana	peroxisome	75.85	76.38
Solyc10g076600.1.1	Tomato	peroxisome	76.08	76.08
PGSC0003DMT400049359	Potato	peroxisome	76.08	76.08
PGSC0003DMT400028641	Potato	cytosol, mitochondrion, peroxisome	75.4	75.4
TraesCS1B01G129300.1	Wheat	peroxisome	72.44	72.77
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	72.44	72.77
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	71.75	72.75
TraesCS1A01G110300.1	Wheat	peroxisome	72.21	72.54
Os01t0159400-01	Rice	nucleus	71.53	72.52
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	70.84	72.33
Zm00001d037521_P002	Maize	peroxisome	71.75	71.59
OQU86270	Sorghum	peroxisome	71.07	71.4
OQU77505	Sorghum	peroxisome	69.93	70.25
Zm00001d039768_P003	Maize	mitochondrion	71.3	69.4
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	72.44	67.23
CDY64742	Canola	cytosol, mitochondrion, plastid	17.54	44.51
CDY59727	Canola	extracellular, peroxisome, plastid	12.3	42.19
KRH75651	Soybean	extracellular	12.53	38.46
CDX73320	Canola	plastid	19.59	35.83
CDY53838	Canola	mitochondrion	22.55	24.21
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	22.32	21.12
CDY34928	Canola	extracellular	5.24	17.97
CDY59726	Canola	cytosol	1.82	9.3
CDY24664	Canola	peroxisome	13.44	7.2
CDY05294	Canola	cytosol	13.21	7.08

Protein Annotations

Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	GO:A0A078GCU6	UniProt:A0A078GCU6
InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C
InterPro:AcylCo_DH/oxidase_C	EnsemblPlants:CDY23164	ProteinID:CDY23164	ProteinID:CDY23164.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003995	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00021694001	InterPro:IPR037069	PFAM:PF00441
PFAM:PF02770	PFAM:PF02771	ScanProsite:PS00072	ScanProsite:PS00073	PANTHER:PTHR43188	PANTHER:PTHR43188:SF1
SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI0004EDB714	:	:	:

Description

BnaA04g05950DBnaA04g05950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCU6]

Coordinates

chrLK032141:-:55617..58768

Molecular Weight (calculated)

47915.9 Da

IEP (calculated)

8.443

GRAVY (calculated)

-0.090

Length

439 amino acids

Sequence
(BLAST)

001: MTVLSSADRD NAEKKVKSSY FDLPPMEISA AFPQATPASK FPPCTSDYYN FNDLLTPEEQ AVRKRVREFM EKEVAPIMTE YWEKAEFPFH IIPKFGALGV
101: AGGSIKGYGC PGLSITANAI ATAEISRVDA SCGTFNLVHT SLGMLTIALC GSEAQKQKYL PDLAQMKTVT CWALTEPDNG SDASALTTTA TKVEGGWVLE
201: GQKRWIGNST FADLLVILAR NTTTNQVNGF LVQKDAPGLT VTKIPNKIGL RIVQNGDILL KNVFVPDEER LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GVYDMCHRYL MERKQFGAPL AAFQLNQQKL VKMLGNVQAM FMMGWRLCKL YESGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGVVG DFLVAKAFGD
401: LEPIFTYEGT YDINTLVTGR EVTGIASFKP PASRGRSRL

Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)

001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL

Arabidopsis Description

ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.