CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
peroxisome 3
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	peroxisome
TargetP:	secretory
WoLF PSORT:	peroxisome
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071541	Potato	cytosol, peroxisome, plastid	37.5	82.76
CDY05294	Canola	cytosol	62.5	9.77
CDY24664	Canola	peroxisome	61.72	9.63
HORVU2Hr1G018720.2	Barley	peroxisome	57.03	9.15
VIT_05s0077g01940.t01	Wine grape	cytosol, mitochondrion, peroxisome	57.81	9.02
Os07t0675000-02	Rice	nucleus	57.81	8.9
OQU90466	Sorghum	cytosol, peroxisome, plasma membrane	57.81	8.85
KRH12085	Soybean	nucleus	57.03	8.82
TraesCS2D01G109900.1	Wheat	golgi, unclear	57.03	8.76
TraesCS2A01G109700.1	Wheat	golgi	57.03	8.76
TraesCS2B01G127700.1	Wheat	peroxisome	56.25	8.64
Solyc01g066310.2.1	Tomato	nucleus	55.47	8.57
Zm00001d007158_P014	Maize	peroxisome, plasma membrane	57.03	8.32
GSMUA_Achr8P30030_001	Banana	cytosol	54.69	8.21
PGSC0003DMT400060245	Potato	cytosol	53.12	8.2
Solyc05g054370.2.1	Tomato	nucleus	53.12	8.2
CDY53838	Canola	mitochondrion	17.97	5.62
CDY23164	Canola	peroxisome	17.97	5.24
CDX95301	Canola	peroxisome	17.97	5.24
CDX78043	Canola	peroxisome	17.97	5.24
CDX73688	Canola	peroxisome	17.97	5.24
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	17.97	4.96
CDY59727	Canola	extracellular, peroxisome, plastid	2.34	2.34
CDY59726	Canola	cytosol	1.56	2.33
KRH37066	Soybean	endoplasmic reticulum, nucleus	11.72	1.97
CDY64742	Canola	cytosol, mitochondrion, plastid	2.34	1.73
CDX73320	Canola	plastid	2.34	1.25

Protein Annotations

EnsemblPlants:CDY34928	EnsemblPlantsGene:GSBRNA2T00057505001	Gene3D:1.20.140.10	GO:A0A078HDM5	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016627	GO:GO:0055114	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C
PANTHER:PTHR10909	PANTHER:PTHR10909:SF282	PFAM:PF00441	ProteinID:CDY34928	ProteinID:CDY34928.1	SUPFAM:SSF47203
UniParc:UPI0004EE3E35	UniProt:A0A078HDM5	MapMan:35.1	:	:	:

Description

BnaA01g32590DBnaA01g32590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDM5]

Coordinates

chrLK032343:-:204699..205684

Molecular Weight (calculated)

14355.6 Da

IEP (calculated)

10.232

GRAVY (calculated)

0.186

Length

128 amino acids

Sequence
(BLAST)

001: MGLFGYFGYQ VFWAKGLLLN LFSVRIVKLG FEKYSEERFS FDYYLPLFNW KRKKARGILP VAKVAAPNMA LKVLDTAVQV HGAACLSSDT FLAHLWATTA
101: RTLRIADGAD EVHLGTIGKL EVQRASKL

Best Arabidopsis Sequence Match ( AT3G06810.1 )
(BLAST)

001: MGSSTGDLVT RIQSAHRFDH DALFRFAADN VSGFPTNPSQ FKVSQFGHGQ SNPTFLIEVG SGSSLKRYVL RKKPPGKLLQ SAHAVDREFQ VLRALGEHTQ
101: VPVPKVFCLC TDPAVIGTAF YIMEFMEGRI FIDPKLPNVA PERRNAIYRA TAKALASLHS ADVDAIGLEK YGRRGNYCKR QIDRWFKQYL ASTSEGKPER
201: NPKMFELVDW LRKNIPAEDS TGATSGLVHG DFRIDNLVFH PSEDRVIGII DWELSTLGNQ MCDVAYSCMH YIVNVQLDKE HVSEGFETTG LPEGMLSMPE
301: FLLEYCSASG KPWPAANWKF YVAFSLFRAA SIYTGVYSRW LMGNASAGER ARNTGVQANE LVESALGYIA RENVLPEHPP SVQRDVSPSY ESLVDGSGRF
401: IPNRKVLELR QKLIKFMETH IYPMENEFSK LAQSDMRWTV HPQEEKLKEM AKREGLWNLF VPVDSAARAR RELAATENKH NLSGKSFDQL FGEGLTNLEY
501: GYLCEIMGRS VWAPQVFNCG APDTGNMEVI LRYGNKEQIS EWLIPLLEGR IRSGFAMTEP QVASSDATNI ECSIRRQGDS YVINGTKWWT SGAMDPRCRV
601: LILMGKTDFN APKHKQQSMI LVDMRTPGIS VKRPLTVFGF DDAPHGHAEI SFENVVVPAK NILLGEGRGF EIAQGRLGPG RLHHCMRLIG AAERGMELMA
701: QRALSRKTFG KFIAQHGSFV SDLAKLRVEL EGTRLLVLEA ADHLDKFGNK KARGILAMAK VAAPNMALKV LDTAIQVHGA AGVSSDTVLA HLWATARTLR
801: IADGPDEVHL GTIGKLELQR ASKL

Arabidopsis Description

IBR3Probable acyl-CoA dehydrogenase IBR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ3]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.