Factsheet for Os07t0675000-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
peroxisome 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

nucleus: 19621931
nucleus: 23303719

msms PMID: 23303719 doi

Q He, L Chen, Y Xu, W Yu

State Key Laboratory for Agrobiotechnology, Institute of Plant Molecular Biology and Agricultural Biotechnology, School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071541	Potato	cytosol, peroxisome, plastid	6.38	91.38
TraesCS2B01G127700.1	Wheat	peroxisome	85.92	85.71
HORVU2Hr1G018720.2	Barley	peroxisome	82.31	85.71
TraesCS2D01G109900.1	Wheat	golgi, unclear	85.8	85.59
TraesCS2A01G109700.1	Wheat	golgi	85.56	85.35
OQU90466	Sorghum	cytosol, peroxisome, plasma membrane	85.44	84.93
Zm00001d007158_P014	Maize	peroxisome, plasma membrane	85.08	80.62
GSMUA_Achr8P30030_001	Banana	cytosol	74.25	72.33
VIT_05s0077g01940.t01	Wine grape	cytosol, mitochondrion, peroxisome	69.43	70.37
Bra029606.1-P	Field mustard	cytosol	68.83	69.76
CDY24664	Canola	peroxisome	68.71	69.63
CDY05294	Canola	cytosol	68.59	69.6
AT3G06810.1	Thale cress	peroxisome	68.59	69.17
Solyc05g054370.2.1	Tomato	nucleus	68.59	68.76
Solyc01g066310.2.1	Tomato	nucleus	68.35	68.6
PGSC0003DMT400060245	Potato	cytosol	68.35	68.52
KRH12085	Soybean	nucleus	67.99	68.24
KRH37066	Soybean	endoplasmic reticulum, nucleus	62.09	67.89
CDY34928	Canola	extracellular	8.9	57.81
Os05t0125500-01	Rice	mitochondrion	10.47	21.27
Os06t0346300-00	Rice	peroxisome	5.78	18.82
Os06t0347100-01	Rice	mitochondrion	5.05	17.36
Os01t0159400-01	Rice	nucleus	7.1	13.63
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	6.98	13.49

Protein Annotations

Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	Gene3D:3.30.200.20	Gene3D:3.90.1200.10	EntrezGene:4344267
MapMan:5.7.3.3.2	EMBL:AK073523	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom
InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	InterPro:Aminoglycoside_PTrfase	ProteinID:BAC83542.1	ProteinID:BAD31978.1	ProteinID:BAF22533.1
ProteinID:BAT03191.1	ProteinID:BAT03192.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003995
GO:GO:0005488	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009653	GO:GO:0009987	GO:GO:0016049	GO:GO:0016627	GO:GO:0030154	GO:GO:0033539
GO:GO:0040007	GO:GO:0048767	GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	InterPro:Kinase-like_dom_sf
EnsemblPlantsGene:Os07g0675000	EnsemblPlants:Os07t0675000-02	PFAM:PF00441	PFAM:PF01636	PFAM:PF02770	PFAM:PF02771
PANTHER:PTHR10909	PANTHER:PTHR10909:SF221	UniProt:Q6ZDX3	SUPFAM:SSF47203	SUPFAM:SSF56112	SUPFAM:SSF56645
UniParc:UPI00001BF36B	RefSeq:XP_015647096.1	SEG:seg	:	:	:

Description

Similar to predicted protein. (Os07t0675000-01);Protein kinase-like domain containing protein. (Os07t0675000-02);Similar to IBR3 (IBA-RESPONSE 3); acyl-CoA dehydrogenase/ oxidoreductase. (Os07t0675000-03)

Coordinates

chr7:+:28552648..28558965

Molecular Weight (calculated)

92079.8 Da

IEP (calculated)

8.389

GRAVY (calculated)

-0.255

Length

831 amino acids

Sequence
(BLAST)

001: MLTSGLLRPV DDAHAIDEAA LLRYAAEHVA GFPSPARGLA LTQFGHGQSN PTYCIEASAP GGVTARYVLR KKPPGAILQS AHAVEREFQV LKALGTYTDV
101: PVPKVFCLCT DASVIGTPFY IMEHLEGLIY PDNKLTGVTP TKRKTIYLAA AETLAAIHKV DVTAIGLQKY GRRDNYCKRQ VERWGRQYLS STGEGKPARY
201: QKMLDLAHWL KEHIPKEDSS AGFGTGLVHG DYRVDNLVFH PTEDRVIGVL DWELSTLGNQ MCDVAYSSLP YIIDATTSTG YSYGGFEYTG IPDGIPPLEE
301: YLAAYCSISA RPWPAASWKF YVAFSLFRGA SIYAGVYHRW TMGNASGGER ARFSGKIANA MVDRAWDIIN RENVLREQPA RGMHASNGPS QEFQRKHEGS
401: ISTKDQGKFV PSEKVMQLRN KLMKFMEDYI YPMESEFYKR AHSTSRWTIH PEEEKLKALA KREGLWNLFI PLDSAARARE LLFEDMSHGS PGSSEELLLG
501: AGLTNLEYGY LCEIMGRSIW APQIFNCGPP DTGNMEVLLR YGTKEQQKQW LVPLLEGKIR SGFAMTEPQV ASSDATNIEC SISRQGDFYV INGTKWWTSG
601: AMDPRCQILV LMGKTDFSAP KHKQQSMILV DVKTPGVQIR RPLLVFGFDD APHGHAEITF ENVRVPATNI LLGEGRGFEI AQGRLGPGRL HHCMRLIGAA
701: ERGMNLMVER ALSRTTFGKK IAQHGSFLAD LAKCRVELEQ ARLLVLEAAD QLDRHGNKKA RGILAMAKVA APNMALKVLD MAMQVHGGAG LSSDTVLSHL
801: WATARTLRIA DGPDEVHLGT IAKLELQRAR M

Best Arabidopsis Sequence Match ( AT3G06810.1 )
(BLAST)

001: MGSSTGDLVT RIQSAHRFDH DALFRFAADN VSGFPTNPSQ FKVSQFGHGQ SNPTFLIEVG SGSSLKRYVL RKKPPGKLLQ SAHAVDREFQ VLRALGEHTQ
101: VPVPKVFCLC TDPAVIGTAF YIMEFMEGRI FIDPKLPNVA PERRNAIYRA TAKALASLHS ADVDAIGLEK YGRRGNYCKR QIDRWFKQYL ASTSEGKPER
201: NPKMFELVDW LRKNIPAEDS TGATSGLVHG DFRIDNLVFH PSEDRVIGII DWELSTLGNQ MCDVAYSCMH YIVNVQLDKE HVSEGFETTG LPEGMLSMPE
301: FLLEYCSASG KPWPAANWKF YVAFSLFRAA SIYTGVYSRW LMGNASAGER ARNTGVQANE LVESALGYIA RENVLPEHPP SVQRDVSPSY ESLVDGSGRF
401: IPNRKVLELR QKLIKFMETH IYPMENEFSK LAQSDMRWTV HPQEEKLKEM AKREGLWNLF VPVDSAARAR RELAATENKH NLSGKSFDQL FGEGLTNLEY
501: GYLCEIMGRS VWAPQVFNCG APDTGNMEVI LRYGNKEQIS EWLIPLLEGR IRSGFAMTEP QVASSDATNI ECSIRRQGDS YVINGTKWWT SGAMDPRCRV
601: LILMGKTDFN APKHKQQSMI LVDMRTPGIS VKRPLTVFGF DDAPHGHAEI SFENVVVPAK NILLGEGRGF EIAQGRLGPG RLHHCMRLIG AAERGMELMA
701: QRALSRKTFG KFIAQHGSFV SDLAKLRVEL EGTRLLVLEA ADHLDKFGNK KARGILAMAK VAAPNMALKV LDTAIQVHGA AGVSSDTVLA HLWATARTLR
801: IADGPDEVHL GTIGKLELQR ASKL

Arabidopsis Description

IBR3Probable acyl-CoA dehydrogenase IBR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ3]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.