Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
- peroxisome 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029606.1-P | Field mustard | cytosol | 93.08 | 93.54 |
| CDY24664 | Canola | peroxisome | 92.96 | 93.41 |
| CDY05294 | Canola | cytosol | 92.84 | 93.41 |
| PGSC0003DMT400071541 | Potato | cytosol, peroxisome, plastid | 6.19 | 87.93 |
| VIT_05s0077g01940.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 75.12 | 75.49 |
| KRH12085 | Soybean | nucleus | 74.76 | 74.4 |
| KRH37066 | Soybean | endoplasmic reticulum, nucleus | 67.96 | 73.68 |
| Solyc01g066310.2.1 | Tomato | nucleus | 71.48 | 71.14 |
| PGSC0003DMT400060245 | Potato | cytosol | 71.36 | 70.93 |
| Solyc05g054370.2.1 | Tomato | nucleus | 71.12 | 70.69 |
| HORVU2Hr1G018720.2 | Barley | peroxisome | 67.35 | 69.55 |
| GSMUA_Achr8P30030_001 | Banana | cytosol | 71.12 | 68.7 |
| Os07t0675000-02 | Rice | nucleus | 69.17 | 68.59 |
| TraesCS2A01G109700.1 | Wheat | golgi | 69.3 | 68.55 |
| TraesCS2B01G127700.1 | Wheat | peroxisome | 69.17 | 68.43 |
| TraesCS2D01G109900.1 | Wheat | golgi, unclear | 69.05 | 68.31 |
| OQU90466 | Sorghum | cytosol, peroxisome, plasma membrane | 69.05 | 68.06 |
| Zm00001d007158_P014 | Maize | peroxisome, plasma membrane | 68.45 | 64.31 |
| AT3G45300.1 | Thale cress | mitochondrion | 9.22 | 18.58 |
| AT3G51840.1 | Thale cress | peroxisome | 6.8 | 12.84 |
Protein Annotations
| Gene3D:1.10.540.10 | Gene3D:1.20.140.10 | Gene3D:2.40.110.10 | Gene3D:3.30.200.20 | Gene3D:3.90.1200.10 | MapMan:5.7.3.3.2 |
| EntrezGene:819865 | ProteinID:AAF63817.1 | ProteinID:AAF63818.1 | ProteinID:AEE74461.1 | EMBL:AK176022 | EMBL:AK229932 |
| ArrayExpress:AT3G06810 | EnsemblPlantsGene:AT3G06810 | RefSeq:AT3G06810 | TAIR:AT3G06810 | RefSeq:AT3G06810-TAIR-G | EnsemblPlants:AT3G06810.1 |
| TAIR:AT3G06810.1 | EMBL:AY091014 | InterPro:Acyl-CoA_Oxase/DH_cen-dom | InterPro:AcylCoA_DH/ox_N | InterPro:AcylCoA_DH/ox_N_sf | InterPro:AcylCoA_DH/oxidase_NM_dom |
| InterPro:AcylCo_DH-like_C | InterPro:AcylCo_DH/oxidase_C | InterPro:Aminoglycoside_PTrfase | Unigene:At.43455 | EMBL:BT002365 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0006629 | GO:GO:0006631 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016049 | GO:GO:0016491 |
| GO:GO:0016627 | GO:GO:0030154 | GO:GO:0033539 | GO:GO:0040007 | GO:GO:0048767 | GO:GO:0050660 |
| GO:GO:0055114 | Symbol:IBR3 | InterPro:IPR037069 | InterPro:Kinase-like_dom_sf | RefSeq:NP_187337.2 | PFAM:PF00441 |
| PFAM:PF01636 | PFAM:PF02770 | PFAM:PF02771 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR10909 | PANTHER:PTHR10909:SF282 | UniProt:Q8RWZ3 | SUPFAM:SSF47203 | SUPFAM:SSF56112 |
| SUPFAM:SSF56645 | UniParc:UPI00000AC388 | SEG:seg | : | : | : |
Description
IBR3Probable acyl-CoA dehydrogenase IBR3 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWZ3]
Coordinates
chr3:+:2146243..2150851
Molecular Weight (calculated)
91718.2 Da
IEP (calculated)
8.457
GRAVY (calculated)
-0.263
Length
824 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSTGDLVT RIQSAHRFDH DALFRFAADN VSGFPTNPSQ FKVSQFGHGQ SNPTFLIEVG SGSSLKRYVL RKKPPGKLLQ SAHAVDREFQ VLRALGEHTQ
101: VPVPKVFCLC TDPAVIGTAF YIMEFMEGRI FIDPKLPNVA PERRNAIYRA TAKALASLHS ADVDAIGLEK YGRRGNYCKR QIDRWFKQYL ASTSEGKPER
201: NPKMFELVDW LRKNIPAEDS TGATSGLVHG DFRIDNLVFH PSEDRVIGII DWELSTLGNQ MCDVAYSCMH YIVNVQLDKE HVSEGFETTG LPEGMLSMPE
301: FLLEYCSASG KPWPAANWKF YVAFSLFRAA SIYTGVYSRW LMGNASAGER ARNTGVQANE LVESALGYIA RENVLPEHPP SVQRDVSPSY ESLVDGSGRF
401: IPNRKVLELR QKLIKFMETH IYPMENEFSK LAQSDMRWTV HPQEEKLKEM AKREGLWNLF VPVDSAARAR RELAATENKH NLSGKSFDQL FGEGLTNLEY
501: GYLCEIMGRS VWAPQVFNCG APDTGNMEVI LRYGNKEQIS EWLIPLLEGR IRSGFAMTEP QVASSDATNI ECSIRRQGDS YVINGTKWWT SGAMDPRCRV
601: LILMGKTDFN APKHKQQSMI LVDMRTPGIS VKRPLTVFGF DDAPHGHAEI SFENVVVPAK NILLGEGRGF EIAQGRLGPG RLHHCMRLIG AAERGMELMA
701: QRALSRKTFG KFIAQHGSFV SDLAKLRVEL EGTRLLVLEA ADHLDKFGNK KARGILAMAK VAAPNMALKV LDTAIQVHGA AGVSSDTVLA HLWATARTLR
801: IADGPDEVHL GTIGKLELQR ASKL
101: VPVPKVFCLC TDPAVIGTAF YIMEFMEGRI FIDPKLPNVA PERRNAIYRA TAKALASLHS ADVDAIGLEK YGRRGNYCKR QIDRWFKQYL ASTSEGKPER
201: NPKMFELVDW LRKNIPAEDS TGATSGLVHG DFRIDNLVFH PSEDRVIGII DWELSTLGNQ MCDVAYSCMH YIVNVQLDKE HVSEGFETTG LPEGMLSMPE
301: FLLEYCSASG KPWPAANWKF YVAFSLFRAA SIYTGVYSRW LMGNASAGER ARNTGVQANE LVESALGYIA RENVLPEHPP SVQRDVSPSY ESLVDGSGRF
401: IPNRKVLELR QKLIKFMETH IYPMENEFSK LAQSDMRWTV HPQEEKLKEM AKREGLWNLF VPVDSAARAR RELAATENKH NLSGKSFDQL FGEGLTNLEY
501: GYLCEIMGRS VWAPQVFNCG APDTGNMEVI LRYGNKEQIS EWLIPLLEGR IRSGFAMTEP QVASSDATNI ECSIRRQGDS YVINGTKWWT SGAMDPRCRV
601: LILMGKTDFN APKHKQQSMI LVDMRTPGIS VKRPLTVFGF DDAPHGHAEI SFENVVVPAK NILLGEGRGF EIAQGRLGPG RLHHCMRLIG AAERGMELMA
701: QRALSRKTFG KFIAQHGSFV SDLAKLRVEL EGTRLLVLEA ADHLDKFGNK KARGILAMAK VAAPNMALKV LDTAIQVHGA AGVSSDTVLA HLWATARTLR
801: IADGPDEVHL GTIGKLELQR ASKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.