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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 4
  • peroxisome 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os06t0346300-00 Rice peroxisome 88.43 83.92
OQU81122 Sorghum plastid 83.88 43.66
Os05t0163700-01 Rice cytosol, mitochondrion, peroxisome 66.94 37.67
Os01t0159400-01 Rice nucleus 65.7 36.72
Os05t0125500-01 Rice mitochondrion 23.97 14.18
Os07t0675000-02 Rice nucleus 17.36 5.05
Protein Annotations
Gene3D:1.20.140.10Gene3D:2.40.110.10MapMan:5.7.3.2.1InterPro:Acyl-CoA_DH_CSInterPro:Acyl-CoA_Oxase/DH_cen-domInterPro:AcylCoA_DH/oxidase_NM_dom
InterPro:AcylCo_DH-like_CInterPro:AcylCo_DH/oxidase_CProteinID:BAF19496.1ProteinID:BAS97657.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0003995GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0016627GO:GO:0050660GO:GO:0055114EnsemblPlantsGene:Os06g0347100EnsemblPlants:Os06t0347100-01PFAM:PF00441
PFAM:PF02770ScanProsite:PS00073PANTHER:PTHR43188PANTHER:PTHR43188:SF2UniProt:Q0DCC7SUPFAM:SSF47203
SUPFAM:SSF56645UniParc:UPI0000E127C4::::
Description
Similar to Acyl-coenzyme A oxidase 4, peroxisomal (EC 1.3.3.6) (AOX 4) (Short- chain acyl-CoA oxidase) (SAOX) (AtCX4) (G6p) (AtG6). (Os06t0347100-01)
Coordinates
chr6:+:13947426..13951272
Molecular Weight (calculated)
26369.9 Da
IEP (calculated)
8.363
GRAVY (calculated)
0.110
Length
242 amino acids
Sequence
(BLAST)
001: VPGGWILNGQ KRWPANGSFA DVFVVLACNT SNNQINGFIV NGGSPGLKIS KIENKTSLRV VQNCDILLED VFVPDDDRLP GANSFQDLVK ALSFSCVIVA
101: WISIGIAAGV YDACLRYLGE RKQFGAPLAA FQLNQEKLVR MLGNIQAMWL LGWRLCKLHD SGRMTTGQAS LGKAWITKQA RETVALGREL LGGNGIVTDF
201: HVGKAFCDME SIYTYEGSYE VNVLVAAREI TGIASIRPTS RL
Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)
001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL
Arabidopsis Description
ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.