CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038291.1-P	Field mustard	mitochondrion	96.82	96.82
AT3G45300.1	Thale cress	mitochondrion	90.71	90.71
VIT_06s0004g03140.t01	Wine grape	mitochondrion	83.86	84.9
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	95.11	83.84
KRH24916	Soybean	mitochondrion	83.37	83.37
Os05t0125500-01	Rice	mitochondrion	82.15	82.15
Zm00001d035475_P001	Maize	mitochondrion	78.0	81.79
KRG89023	Soybean	mitochondrion	81.66	81.46
GSMUA_Achr6P08800_001	Banana	mitochondrion	81.42	81.42
HORVU1Hr1G013820.4	Barley	mitochondrion	78.0	80.96
PGSC0003DMT400020955	Potato	mitochondrion	81.42	80.83
PGSC0003DMT400069152	Potato	mitochondrion	80.93	80.34
Solyc11g069180.1.1	Tomato	plastid	80.68	80.1
TraesCS1B01G085100.1	Wheat	mitochondrion	79.71	79.9
TraesCS1A01G066800.2	Wheat	mitochondrion	79.71	79.9
Solyc06g073560.2.1	Tomato	mitochondrion	80.2	79.61
TraesCS1D01G067800.2	Wheat	mitochondrion	80.2	79.23
EES18942	Sorghum	mitochondrion	72.13	78.88
Zm00001d010970_P003	Maize	cytosol, peroxisome, plasma membrane	79.46	58.14
CDX73688	Canola	peroxisome	24.45	22.78
CDX95301	Canola	peroxisome	24.45	22.78
CDX78043	Canola	peroxisome	24.45	22.78
CDY23164	Canola	peroxisome	24.21	22.55
CDY34928	Canola	extracellular	5.62	17.97
CDY64742	Canola	cytosol, mitochondrion, plastid	5.38	12.72
CDY59727	Canola	extracellular, peroxisome, plastid	3.42	10.94
CDX73320	Canola	plastid	5.62	9.58
CDY05294	Canola	cytosol	18.83	9.4
CDY24664	Canola	peroxisome	18.83	9.39
CDY59726	Canola	cytosol	1.71	8.14

Protein Annotations

KEGG:00280+1.3.8.4	Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:4.2.7.3	GO:A0A078IXU2
UniProt:A0A078IXU2	InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom
InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	EnsemblPlants:CDY53838	ProteinID:CDY53838	ProteinID:CDY53838.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00011530001	InterPro:IPR037069
InterPro:IVD	PFAM:PF00441	PFAM:PF02770	PFAM:PF02771	PIRSF:PIRSF016578	ScanProsite:PS00072
ScanProsite:PS00073	PANTHER:PTHR43884	PANTHER:PTHR43884:SF10	SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI0004EEB5C6
SEG:seg	:	:	:	:	:

Description

BnaA06g38800DBnaA06g38800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXU2]

Coordinates

chrLK033242:-:29006..31947

Molecular Weight (calculated)

44656.9 Da

IEP (calculated)

8.192

GRAVY (calculated)

-0.146

Length

409 amino acids

Sequence
(BLAST)

001: MQRLFAARSV LGNAVKTRRR QHLSSLSSSL LFDETQLQFK ESVSKFAQDV IAPHAERIDK TNSFPKDVNL WKLMGEFNLH GITAPEEYGG LGLGYLYHCI
101: AMEEISRASG SVALSYGAHS NLCINQLVRN GNTSQKHKYL PKLISGEHVG ALAMSEPNAG SDVVSMKCKA DKVDGGFLIN GNKMWCTNGP SAQTLIVYAK
201: TDTKAGSKGI TAFVIEKGMA GFSTAQKLDK LGMRGSDTCE LVFENCFVPE ENILGKEGKG VYVLMSGLDL ERLVLAAGPL GIMQACLDIV LPYIRQREQF
301: GRPLGEFQFI QGKVADMYTA LQSSRSYVYS VARECDNGKV DPKDCAGTIL CAAERATQVA LQAIQCLGGN GYINEYATGR LLRDAKLYEI GAGTSEIRRM
401: VIGRELFKE

Best Arabidopsis Sequence Match ( AT3G45300.1 )
(BLAST)

001: MQRFFSARSI LGYAVKTRRR SFSSRSSSLL FDDTQLQFKE SVSKFAQDNI APHAERIDKT NSFPKDVNLW KLMGEFNLHG ITAPEEYGGL GLGYLYHCIA
101: MEEISRASGS VALSYGAHSN LCINQLVRNG TAAQKEKYLP KLISGEHVGA LAMSEPNAGS DVVGMKCKAE KVDGGYILNG NKMWCTNGPS AETLVVYAKT
201: DTKAGSKGIT AFIIEKGMTG FSTAQKLDKL GMRGSDTCEL VFENCFVPEE NILDKEGKGV YVLMSGLDLE RLVLAAGPLG IMQACLDNVL PYIRQREQFG
301: RPVGEFQFIQ GKVADMYTAL QSSRSYVYSV ARDCDNGKVD PKDCAGTILC AAERATQVAL QAIQCLGGNG YINEYATGRL LRDAKLYEIG AGTSEIRRIV
401: IGRELFKEE

Arabidopsis Description

IVDIsovaleryl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SWG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.