Factsheet for GSMUA_Achr6P08800_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g03140.t01	Wine grape	mitochondrion	85.57	86.63
Os05t0125500-01	Rice	mitochondrion	85.82	85.82
Zm00001d035475_P001	Maize	mitochondrion	80.68	84.62
KRH24916	Soybean	mitochondrion	84.35	84.35
HORVU1Hr1G013820.4	Barley	mitochondrion	81.17	84.26
TraesCS1B01G085100.1	Wheat	mitochondrion	83.86	84.07
TraesCS1A01G066800.2	Wheat	mitochondrion	83.86	84.07
PGSC0003DMT400020955	Potato	mitochondrion	83.62	83.01
TraesCS1D01G067800.2	Wheat	mitochondrion	83.86	82.85
KRG89023	Soybean	mitochondrion	82.4	82.2
EES18942	Sorghum	mitochondrion	75.06	82.09
Solyc11g069180.1.1	Tomato	plastid	82.64	82.04
AT3G45300.1	Thale cress	mitochondrion	81.66	81.66
Bra038291.1-P	Field mustard	mitochondrion	81.66	81.66
CDY53838	Canola	mitochondrion	81.42	81.42
PGSC0003DMT400069152	Potato	mitochondrion	80.68	80.1
Solyc06g073560.2.1	Tomato	mitochondrion	79.71	79.13
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	80.44	70.91
Zm00001d010970_P003	Maize	cytosol, peroxisome, plasma membrane	83.37	61.0
GSMUA_Achr8P21130_001	Banana	peroxisome	24.21	22.71
GSMUA_Achr8P30030_001	Banana	cytosol	19.07	9.14

Protein Annotations

KEGG:00280+1.3.8.4	Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:4.2.7.3	InterPro:Acyl-CoA_DH_CS
InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006552	GO:GO:0008150	GO:GO:0008152	GO:GO:0008470	GO:GO:0009056	GO:GO:0009083
GO:GO:0009987	GO:GO:0016491	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G08800_001
EnsemblPlants:GSMUA_Achr6P08800_001	EnsemblPlants:GSMUA_Achr6T08800_001	InterPro:IPR037069	InterPro:IVD	UniProt:M0T5C9	PFAM:PF00441
PFAM:PF02770	PFAM:PF02771	PIRSF:PIRSF016578	ScanProsite:PS00072	ScanProsite:PS00073	PANTHER:PTHR43884
PANTHER:PTHR43884:SF10	SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI000296C628	SEG:seg	:

Description

Isovaleryl-CoA dehydrogenase 1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr6G08800_001]

Coordinates

chr6:+:5816666..5823596

Molecular Weight (calculated)

44964.1 Da

IEP (calculated)

7.014

GRAVY (calculated)

-0.149

Length

409 amino acids

Sequence
(BLAST)

001: MQRLRATRRA AILCWDHWSK QRAFFSTSLL FDDTQKQFKE SVHQFAQENI APHAAKIDAT NHFPQDVNLW KLMGDFDLHG ITAPEEYGGL GLGYLYHCIA
101: MEEISRASGS VGLSYGAHSN LCINQLVRHG TSAQKQKYLL KLISGEHVGA LAMSEPNAGS DVVSMKCKAD RVDGGYVING NKMWCTNGPV AQTLVVYAKT
201: DISAGSKGIT AFIIEKGMPG FSTAQKLDKL GMRGSDTCEL VFEYCFVPEE NVLGQEGKGV YVMMSGLDLE RLVLAAGPLG LMQACLDEAI PYVRQREQFG
301: HPIGEFQFIQ GKLADMYTSL QSSRAFVYSV ARDCDNGKVD RKDCAGVILL AAEKATQVAL QAIQCLGGNG YVNEYPTGRL LRDAKLFEIG AGTSEIRRMI
401: IGRELFKQD

Best Arabidopsis Sequence Match ( AT3G45300.1 )
(BLAST)

001: MQRFFSARSI LGYAVKTRRR SFSSRSSSLL FDDTQLQFKE SVSKFAQDNI APHAERIDKT NSFPKDVNLW KLMGEFNLHG ITAPEEYGGL GLGYLYHCIA
101: MEEISRASGS VALSYGAHSN LCINQLVRNG TAAQKEKYLP KLISGEHVGA LAMSEPNAGS DVVGMKCKAE KVDGGYILNG NKMWCTNGPS AETLVVYAKT
201: DTKAGSKGIT AFIIEKGMTG FSTAQKLDKL GMRGSDTCEL VFENCFVPEE NILDKEGKGV YVLMSGLDLE RLVLAAGPLG IMQACLDNVL PYIRQREQFG
301: RPVGEFQFIQ GKVADMYTAL QSSRSYVYSV ARDCDNGKVD PKDCAGTILC AAERATQVAL QAIQCLGGNG YINEYATGRL LRDAKLYEIG AGTSEIRRIV
401: IGRELFKEE

Arabidopsis Description

IVDIsovaleryl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SWG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.