Factsheet for Zm00001d035475_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18942	Sorghum	mitochondrion	85.64	89.3
HORVU1Hr1G013820.4	Barley	mitochondrion	89.74	88.83
Os05t0125500-01	Rice	mitochondrion	90.77	86.55
TraesCS1A01G066800.2	Wheat	mitochondrion	89.74	85.78
TraesCS1B01G085100.1	Wheat	mitochondrion	89.49	85.54
TraesCS1D01G067800.2	Wheat	mitochondrion	89.49	84.3
GSMUA_Achr6P08800_001	Banana	mitochondrion	84.62	80.68
VIT_06s0004g03140.t01	Wine grape	mitochondrion	83.33	80.45
KRH24916	Soybean	mitochondrion	83.33	79.46
KRG89023	Soybean	mitochondrion	83.33	79.27
CDY53838	Canola	mitochondrion	81.79	78.0
AT3G45300.1	Thale cress	mitochondrion	81.79	78.0
Bra038291.1-P	Field mustard	mitochondrion	81.54	77.75
Solyc11g069180.1.1	Tomato	plastid	80.51	76.21
PGSC0003DMT400020955	Potato	mitochondrion	80.26	75.97
PGSC0003DMT400069152	Potato	mitochondrion	78.72	74.51
Solyc06g073560.2.1	Tomato	mitochondrion	78.46	74.27
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	81.03	68.1
Zm00001d010970_P003	Maize	cytosol, peroxisome, plasma membrane	94.36	65.83
Zm00001d039768_P003	Maize	mitochondrion	26.15	22.62
Zm00001d037521_P002	Maize	peroxisome	25.13	22.27
Zm00001d007158_P014	Maize	peroxisome, plasma membrane	21.28	9.46

Protein Annotations

KEGG:00280+1.3.8.4	Gene3D:1.10.540.10	Gene3D:1.20.140.10	EntrezGene:100217040	Gene3D:2.40.110.10	MapMan:4.2.7.3
ProteinID:AQK79037.1	InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom
InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	UniProt:B4FL28	EMBL:BT037816	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003995	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	InterPro:IVD	PFAM:PF00441
PFAM:PF02770	PFAM:PF02771	PIRSF:PIRSF016578	ScanProsite:PS00072	ScanProsite:PS00073	PANTHER:PTHR43884
PANTHER:PTHR43884:SF10	SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI00017B6A69	EnsemblPlantsGene:Zm00001d035475	EnsemblPlants:Zm00001d035475_P001
EnsemblPlants:Zm00001d035475_T001	SEG:seg	:	:	:	:

Description

Isovaleryl-CoA dehydrogenase mitochondrial

Coordinates

chr6:+:28512487..28520162

Molecular Weight (calculated)

42547.4 Da

IEP (calculated)

7.033

GRAVY (calculated)

-0.168

Length

390 amino acids

Sequence
(BLAST)

001: MPDRPNSSPA RPLAPRRQFK ESVRKFAQEA IAPRAAAIDA SNHFPRDVDL WRLMGDFNLH GLTAPEEYGG MGLGYMYHCI AMEEITRASG AVGLSYGAHS
101: NLCINQLVRH GNPEQKLKYL PKLISGEHIG ALAMSEPNSG SDVVSMKCKA EKVDGGYVLN GNKMWCTNGP SAQTLVVYAK TDLAAGSKGI TAFIIEKGMP
201: GFSTAQKLDK LGMRGSDTCE LVFENCFVPC ENVLGEEGKG VYVMMSGLDL ERLVLAAGPI GLMQACLDVV LPYVRQREQF GRPIGEFQFI QGKMADMYTS
301: LQSSRSFVYS VARDCDNGKV DRKDCAGVIL FAAENATQVA LQAIQCLGGN GYINEYPTGR LLRDAKLFEI GAGTSEVRRM IIGRELFKED

Best Arabidopsis Sequence Match ( AT3G45300.1 )
(BLAST)

001: MQRFFSARSI LGYAVKTRRR SFSSRSSSLL FDDTQLQFKE SVSKFAQDNI APHAERIDKT NSFPKDVNLW KLMGEFNLHG ITAPEEYGGL GLGYLYHCIA
101: MEEISRASGS VALSYGAHSN LCINQLVRNG TAAQKEKYLP KLISGEHVGA LAMSEPNAGS DVVGMKCKAE KVDGGYILNG NKMWCTNGPS AETLVVYAKT
201: DTKAGSKGIT AFIIEKGMTG FSTAQKLDKL GMRGSDTCEL VFENCFVPEE NILDKEGKGV YVLMSGLDLE RLVLAAGPLG IMQACLDNVL PYIRQREQFG
301: RPVGEFQFIQ GKVADMYTAL QSSRSYVYSV ARDCDNGKVD PKDCAGTILC AAERATQVAL QAIQCLGGNG YINEYATGRL LRDAKLYEIG AGTSEIRRIV
401: IGRELFKEE

Arabidopsis Description

IVDIsovaleryl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SWG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.