Factsheet for HORVU1Hr1G013820.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G085100.1	Wheat	mitochondrion	93.4	90.2
TraesCS1A01G066800.2	Wheat	mitochondrion	93.4	90.2
Zm00001d035475_P001	Maize	mitochondrion	88.83	89.74
TraesCS1D01G067800.2	Wheat	mitochondrion	93.4	88.89
Os05t0125500-01	Rice	mitochondrion	89.85	86.55
EES18942	Sorghum	mitochondrion	80.2	84.49
KRH24916	Soybean	mitochondrion	85.03	81.91
KRG89023	Soybean	mitochondrion	84.52	81.22
GSMUA_Achr6P08800_001	Banana	mitochondrion	84.26	81.17
VIT_06s0004g03140.t01	Wine grape	mitochondrion	82.99	80.94
AT3G45300.1	Thale cress	mitochondrion	81.22	78.24
CDY53838	Canola	mitochondrion	80.96	78.0
Bra038291.1-P	Field mustard	mitochondrion	80.71	77.75
PGSC0003DMT400020955	Potato	mitochondrion	80.2	76.7
Solyc11g069180.1.1	Tomato	plastid	79.95	76.46
PGSC0003DMT400069152	Potato	mitochondrion	77.92	74.51
Solyc06g073560.2.1	Tomato	mitochondrion	77.67	74.27
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	80.46	68.32
Zm00001d010970_P003	Maize	cytosol, peroxisome, plasma membrane	88.07	62.08
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	24.37	20.3
HORVU4Hr1G027270.74	Barley	cytosol	8.12	18.82
HORVU2Hr1G018720.2	Barley	peroxisome	20.81	10.28

Protein Annotations

KEGG:00280+1.3.8.4	Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:4.2.7.3	UniProt:A0A287EP65
InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C
InterPro:AcylCo_DH/oxidase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	GO:GO:0006552	GO:GO:0008150	GO:GO:0008152	GO:GO:0008470	GO:GO:0009056
GO:GO:0009083	GO:GO:0009987	GO:GO:0016491	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114
EnsemblPlantsGene:HORVU1Hr1G013820	EnsemblPlants:HORVU1Hr1G013820.4	InterPro:IPR037069	InterPro:IVD	PFAM:PF00441	PFAM:PF02770
PFAM:PF02771	PIRSF:PIRSF016578	ScanProsite:PS00072	ScanProsite:PS00073	PANTHER:PTHR43884	PANTHER:PTHR43884:SF10
SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI000B47FFB9	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:+:37374774..37379209

Molecular Weight (calculated)

42755.4 Da

IEP (calculated)

7.450

GRAVY (calculated)

-0.225

Length

394 amino acids

Sequence
(BLAST)

001: PRAGGGSPPP PPPSSSTTRR SRFKESVHRF AQEHIAPHAA AIDASNHLPK EVNLWKLMGD FNLHGLTSPE EYGGLGLGYM YHCIAMEEIS RASGSVGLSY
101: GAHSNLCINQ LVRHGSPTQK EKYLPKLISG DHIGALAMSE PNSGSDVVSM KCKAEKVDGG YVINGNKMWC TNGPSAQTLV VYAKTDITAG SKGITAFIIE
201: KGMPGFSTAQ KLDKLGMRGS DTCELVFENC FVPRENVLGE EGKGVYVMMS GLDLERLVLA GGPIGLMQAC LDVVLPYVRQ REQFGRPIGE FQFLQGKMAD
301: MYTSLQSSRS FVYSVARDCD NGKVDRKDCA GVILFAAERA TQVALEAIQC LGGNGYINEY PTGRLLRDAK LFEIGAGTSE IRRMIIGREL FKED

Best Arabidopsis Sequence Match ( AT3G45300.1 )
(BLAST)

001: MQRFFSARSI LGYAVKTRRR SFSSRSSSLL FDDTQLQFKE SVSKFAQDNI APHAERIDKT NSFPKDVNLW KLMGEFNLHG ITAPEEYGGL GLGYLYHCIA
101: MEEISRASGS VALSYGAHSN LCINQLVRNG TAAQKEKYLP KLISGEHVGA LAMSEPNAGS DVVGMKCKAE KVDGGYILNG NKMWCTNGPS AETLVVYAKT
201: DTKAGSKGIT AFIIEKGMTG FSTAQKLDKL GMRGSDTCEL VFENCFVPEE NILDKEGKGV YVLMSGLDLE RLVLAAGPLG IMQACLDNVL PYIRQREQFG
301: RPVGEFQFIQ GKVADMYTAL QSSRSYVYSV ARDCDNGKVD PKDCAGTILC AAERATQVAL QAIQCLGGNG YINEYATGRL LRDAKLYEIG AGTSEIRRIV
401: IGRELFKEE

Arabidopsis Description

IVDIsovaleryl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SWG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.