CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035475_P001	Maize	mitochondrion	89.3	85.64
Os05t0125500-01	Rice	mitochondrion	89.3	81.66
HORVU1Hr1G013820.4	Barley	mitochondrion	84.49	80.2
TraesCS1B01G085100.1	Wheat	mitochondrion	87.17	79.9
TraesCS1A01G066800.2	Wheat	mitochondrion	87.17	79.9
TraesCS1D01G067800.2	Wheat	mitochondrion	87.17	78.74
VIT_06s0004g03140.t01	Wine grape	mitochondrion	81.28	75.25
GSMUA_Achr6P08800_001	Banana	mitochondrion	82.09	75.06
KRH24916	Soybean	mitochondrion	80.21	73.35
AT3G45300.1	Thale cress	mitochondrion	79.41	72.62
Bra038291.1-P	Field mustard	mitochondrion	79.14	72.37
CDY53838	Canola	mitochondrion	78.88	72.13
KRG89023	Soybean	mitochondrion	78.88	71.95
Solyc11g069180.1.1	Tomato	plastid	77.81	70.63
PGSC0003DMT400020955	Potato	mitochondrion	77.27	70.15
Solyc06g073560.2.1	Tomato	mitochondrion	76.2	69.17
PGSC0003DMT400069152	Potato	mitochondrion	75.94	68.93
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	79.68	64.22
OQU86270	Sorghum	peroxisome	24.87	21.28
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	24.06	20.79
OQU77505	Sorghum	peroxisome	22.99	19.68
OQU81122	Sorghum	plastid	23.8	19.14
OQU90466	Sorghum	cytosol, peroxisome, plasma membrane	20.05	8.97

Protein Annotations

KEGG:00280+1.3.8.4	Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:50.1.3	InterPro:Acyl-CoA_DH_CS
InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C
UniProt:C5YZ44	EnsemblPlants:EES18942	ProteinID:EES18942	ProteinID:EES18942.2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003995	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006552	GO:GO:0008150
GO:GO:0008152	GO:GO:0008470	GO:GO:0009056	GO:GO:0009083	GO:GO:0009987	GO:GO:0016491
GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	InterPro:IVD	PFAM:PF00441
PFAM:PF02770	PFAM:PF02771	PIRSF:PIRSF016578	ScanProsite:PS00072	ScanProsite:PS00073	PANTHER:PTHR43884
PANTHER:PTHR43884:SF10	EnsemblPlantsGene:SORBI_3009G027000	SUPFAM:SSF47203	SUPFAM:SSF56645	unigene:Sbi.2692	UniParc:UPI00081ABA24
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:2424502..2427667

Molecular Weight (calculated)

41028.5 Da

IEP (calculated)

6.619

GRAVY (calculated)

-0.120

Length

374 amino acids

Sequence
(BLAST)

001: MQRWLPALLR RAAPAVSGGG VARLFASSSL LFDDTQVQFK ESVRKFAQEA IAPHAAAIDA SNHFPREVDL WRLMGDFNLH GLTAPEEYGG MGLGYMYHCI
101: AMEEITRASG AVGLSYGAHS NLCINQLVRH GNPEQKLKYL PKLISGEHIG ALAMSEPNSG SDVVSMKCKA EKVDGGYVLN GNKMWFSTAQ KLDKLGMRGS
201: DTCELVFENC FVPRENVLGE EGKGVYVMMS GLDLERLVLA GGPIGLMQAC LDVVLPYVRQ REQFGRPIGE FQFIQGKMAD MYTSLQSSRS FVYSVARDCD
301: NGKVDRKDCA GVILFAAENA TQVALQAIQC LGGNGYINEY PTGRLLRDAK LFEIGAGTSE VRRMIIGREL FKED

Best Arabidopsis Sequence Match ( AT3G45300.1 )
(BLAST)

001: MQRFFSARSI LGYAVKTRRR SFSSRSSSLL FDDTQLQFKE SVSKFAQDNI APHAERIDKT NSFPKDVNLW KLMGEFNLHG ITAPEEYGGL GLGYLYHCIA
101: MEEISRASGS VALSYGAHSN LCINQLVRNG TAAQKEKYLP KLISGEHVGA LAMSEPNAGS DVVGMKCKAE KVDGGYILNG NKMWCTNGPS AETLVVYAKT
201: DTKAGSKGIT AFIIEKGMTG FSTAQKLDKL GMRGSDTCEL VFENCFVPEE NILDKEGKGV YVLMSGLDLE RLVLAAGPLG IMQACLDNVL PYIRQREQFG
301: RPVGEFQFIQ GKVADMYTAL QSSRSYVYSV ARDCDNGKVD PKDCAGTILC AAERATQVAL QAIQCLGGNG YINEYATGRL LRDAKLYEIG AGTSEIRRIV
401: IGRELFKEE

Arabidopsis Description

IVDIsovaleryl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SWG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.