CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

cytosol 2
plastid 1
peroxisome 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037521_P002	Maize	peroxisome	96.3	94.77
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	91.22	91.86
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	91.69	90.85
TraesCS1B01G129300.1	Wheat	peroxisome	91.69	90.85
TraesCS1A01G110300.1	Wheat	peroxisome	89.84	89.02
OQU77505	Sorghum	peroxisome	86.84	86.04
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	90.3	82.66
OQU86270	Sorghum	peroxisome	83.37	82.61
GSMUA_Achr8P21130_001	Banana	peroxisome	79.91	79.36
VIT_08s0105g00460.t01	Wine grape	peroxisome	78.98	76.68
Solyc10g085200.1.1	Tomato	peroxisome	72.98	75.78
KRH49397	Soybean	endoplasmic reticulum	70.44	75.68
AT3G51840.1	Thale cress	peroxisome	74.83	74.31
PGSC0003DMT400049359	Potato	peroxisome	75.29	74.26
KRH65710	Soybean	peroxisome	74.83	74.14
Solyc10g076600.1.1	Tomato	peroxisome	74.83	73.8
KRH00268	Soybean	peroxisome	73.9	73.73
CDX73688	Canola	peroxisome	73.67	72.67
Bra006879.1-P	Field mustard	peroxisome	73.44	72.44
CDX78043	Canola	peroxisome	73.44	72.44
PGSC0003DMT400028641	Potato	cytosol, mitochondrion, peroxisome	73.21	72.21
CDX95301	Canola	peroxisome	72.98	71.98
CDY23164	Canola	peroxisome	72.75	71.75
OQU81122	Sorghum	plastid	61.43	57.2
KRH75651	Soybean	extracellular	12.24	37.06
CDY64742	Canola	cytosol, mitochondrion, plastid	14.09	35.26
CDY59727	Canola	extracellular, peroxisome, plastid	10.16	34.38
Bra010066.1-P	Field mustard	cytosol, peroxisome, plasma membrane	12.01	30.77
CDX73320	Canola	plastid	14.32	25.83
EES18942	Sorghum	mitochondrion	20.79	24.06
CDY59726	Canola	cytosol	1.62	8.14
OQU90466	Sorghum	cytosol, peroxisome, plasma membrane	13.63	7.06

Protein Annotations

Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom
InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	UniProt:C5Z100
EnsemblPlants:EES17775	ProteinID:EES17775	ProteinID:EES17775.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003995	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016627
GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	PFAM:PF00441	PFAM:PF02770	PFAM:PF02771
ScanProsite:PS00073	PANTHER:PTHR43188	PANTHER:PTHR43188:SF1	EnsemblPlantsGene:SORBI_3009G057300	SUPFAM:SSF47203	SUPFAM:SSF56645
unigene:Sbi.5398	UniParc:UPI0001C80892	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:5860896..5865435

Molecular Weight (calculated)

46662.7 Da

IEP (calculated)

8.964

GRAVY (calculated)

0.046

Length

433 amino acids

Sequence
(BLAST)

001: MGSLGGSAGA GDGGKVGLPA LDVALAFPQA TPASLFPPAA SDYYQFDDLL TEEEKALRKK VRGIMEKEIP PIMTEYWEKA EFPFHAIPSL ASLGLAGGTI
101: KGYGCPGLSL TASAISIAEV ARVDASCSTF ILVHSSLAMS TIALCGSEAQ KQKYLPSLAE FKTIGCWALT EPDYGSDASS LRTAATKVPG GWQLDGQKRW
201: IGNSTFADVL VILARNADTN QLNGFIVKKG APGLKATKIQ NKIGLRMVQN GDIILNKVFV PEEDRLTGIN SFQDINKVLA MSRIMVAWQP IGISMGVFDI
301: CHRYLKERKQ FGAPLAAFQL NQEKLVRMLG NIQAMLLVGW RLCKFYESGK MTPGRSSLGK AWTSQKAREV VSLGRELLGG NGILADFLVA KAFCDLEPIF
401: SYEGTYDINS LVTGREITGI ASFKPAMSAK SRL

Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)

001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL

Arabidopsis Description

ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.