CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00268	Soybean	peroxisome	41.96	13.82
KRH65710	Soybean	peroxisome	39.16	12.81
VIT_08s0105g00460.t01	Wine grape	peroxisome	39.16	12.56
CDX95301	Canola	peroxisome	38.46	12.53
CDY23164	Canola	peroxisome	38.46	12.53
CDX73688	Canola	peroxisome	37.76	12.3
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	37.06	12.24
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	37.06	12.13
TraesCS1B01G129300.1	Wheat	peroxisome	37.06	12.13
Bra006879.1-P	Field mustard	peroxisome	37.06	12.07
Solyc10g076600.1.1	Tomato	peroxisome	37.06	12.07
AT3G51840.1	Thale cress	peroxisome	36.36	11.93
KRH49397	Soybean	endoplasmic reticulum	33.57	11.91
TraesCS1A01G110300.1	Wheat	peroxisome	36.36	11.9
CDX78043	Canola	peroxisome	36.36	11.85
PGSC0003DMT400049359	Potato	peroxisome	36.36	11.85
Zm00001d037521_P002	Maize	peroxisome	36.36	11.82
Os01t0159400-01	Rice	nucleus	35.66	11.78
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	34.97	11.63
Zm00001d039768_P003	Maize	mitochondrion	36.36	11.53
Solyc10g085200.1.1	Tomato	peroxisome	33.57	11.51
OQU86270	Sorghum	peroxisome	34.97	11.44
GSMUA_Achr8P21130_001	Banana	peroxisome	34.27	11.24
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	37.06	11.21
PGSC0003DMT400028641	Potato	cytosol, mitochondrion, peroxisome	34.27	11.16
OQU77505	Sorghum	peroxisome	32.87	10.76
KRG89023	Soybean	mitochondrion	19.58	6.83
KRH24916	Soybean	mitochondrion	18.88	6.6
KRH37066	Soybean	endoplasmic reticulum, nucleus	12.59	2.37
KRH12085	Soybean	nucleus	12.59	2.17

Protein Annotations

Gene3D:2.40.110.10	MapMan:35.1	UniProt:A0A0R0LEQ4	EMBL:ACUP02000441	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/oxidase_NM_dom
EnsemblPlantsGene:GLYMA_01G099000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	EnsemblPlants:KRH75651
ProteinID:KRH75651	ProteinID:KRH75651.1	PFAM:PF02770	PANTHER:PTHR43188	PANTHER:PTHR43188:SF1	SUPFAM:SSF56645
SignalP:SignalP-noTM	UniParc:UPI0006EE0EA7	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:32997473..33003559

Molecular Weight (calculated)

16152.9 Da

IEP (calculated)

10.397

GRAVY (calculated)

0.080

Length

143 amino acids

Sequence
(BLAST)

001: MICLILLSMS MGFWWGTLLN RLQSEMFRRL VSMNVILRSI VWAEARKQKY LPSLAQMKAI ACWAFTKLDY GNDANALKTT TTKMGGGWIL DGQKRWIGNN
101: TFAGLLVIFT RNTTTNQING LGMAFETHLE GAQRFAEGSS YVM

Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)

001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL

Arabidopsis Description

ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.