Factsheet for VIT_08s0105g00460.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 5
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49397	Soybean	endoplasmic reticulum	77.35	85.61
Solyc10g085200.1.1	Tomato	peroxisome	78.25	83.69
KRH00268	Soybean	peroxisome	81.17	83.41
KRH65710	Soybean	peroxisome	81.17	82.84
GSMUA_Achr8P21130_001	Banana	peroxisome	80.72	82.57
AT3G51840.1	Thale cress	peroxisome	79.82	81.65
PGSC0003DMT400049359	Potato	peroxisome	79.6	80.87
Solyc10g076600.1.1	Tomato	peroxisome	78.92	80.18
PGSC0003DMT400028641	Potato	cytosol, mitochondrion, peroxisome	78.7	79.95
CDX73688	Canola	peroxisome	78.48	79.73
Bra006879.1-P	Field mustard	peroxisome	78.25	79.5
CDX78043	Canola	peroxisome	78.25	79.5
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	76.46	79.3
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	76.68	78.98
CDX95301	Canola	peroxisome	77.13	78.36
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	76.68	78.26
TraesCS1B01G129300.1	Wheat	peroxisome	76.68	78.26
TraesCS1A01G110300.1	Wheat	peroxisome	76.68	78.26
CDY23164	Canola	peroxisome	76.68	77.9
Os01t0159400-01	Rice	nucleus	75.56	77.83
Zm00001d037521_P002	Maize	peroxisome	76.46	77.5
OQU86270	Sorghum	peroxisome	75.78	77.35
OQU77505	Sorghum	peroxisome	73.32	74.83
Zm00001d039768_P003	Maize	mitochondrion	73.77	72.95
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	76.68	72.3
KRH75651	Soybean	extracellular	12.56	39.16
VIT_06s0004g03140.t01	Wine grape	mitochondrion	23.09	25.5
VIT_05s0077g01940.t01	Wine grape	cytosol, mitochondrion, peroxisome	12.56	6.83

Protein Annotations

Gene3D:1.10.540.10	Gene3D:1.20.140.10	EntrezGene:100257352	wikigene:100257352	Gene3D:2.40.110.10	MapMan:5.7.3.2.1
InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C
InterPro:AcylCo_DH/oxidase_C	ProteinID:CBI22806	ProteinID:CBI22806.3	UniProt:D7SY23	EMBL:FN595245	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	EntrezGene:LOC100257352
wikigene:LOC100257352	PFAM:PF00441	PFAM:PF02770	PFAM:PF02771	ScanProsite:PS00073	PANTHER:PTHR43188
PANTHER:PTHR43188:SF1	SUPFAM:SSF47203	SUPFAM:SSF56645	TIGR:TC68034	UniParc:UPI0001BE1D29	ArrayExpress:VIT_08s0105g00460
EnsemblPlantsGene:VIT_08s0105g00460	EnsemblPlants:VIT_08s0105g00460.t01	unigene:Vvi.1475	RefSeq:XP_002264086	RefSeq:XP_002264086.2	RefSeq:XP_003632582
RefSeq:XP_003632582.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:+:7757606..7776034

Molecular Weight (calculated)

48817.0 Da

IEP (calculated)

8.974

GRAVY (calculated)

-0.064

Length

446 amino acids

Sequence
(BLAST)

001: MTIYSSNNAG YSSNNPDDSE KAKKGSYFGL PSLDVSVAFP QATPASIFPP CASDYYQFDD LLTPEEQALR MKVRKCVEKE IAPIMTEYWE KAEFPFHVVP
101: KLAALRIAGG TIKGYGCPGL SVTASAITTA EVSRVDASCS TFILVHSSLA MLTIALCGSE AQKQKYLPSL AQLNTIACWA LTEPDYGSDA SSLKTTATKV
201: EGGWILEGQK RWIGNSTFAD VLIIFARNTT TNQINGYIVK KGAPGLTATK IQNKIGLRIV QNGDIQFKKV FVPDEDRLPG VNSFQDTNKV LAVSRVMVAW
301: QPIGISMGAY DMCHRYLKER KQFGAPLAAF QINQQKLVEM LGNIQAMTLV GWRLCKLYEK GKMTPGHASL AKAWITLKAR ETLALGRELL GGNGILADFL
401: VAKAFCDLEP IYTYEGTYDI NTLVTGREIT GIASFKPAAL NRRSRL

Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)

001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL

Arabidopsis Description

ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.