Factsheet for Bra006879.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 5
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78043	Canola	peroxisome	99.32	99.32
CDX73688	Canola	peroxisome	98.86	98.86
AT3G51840.1	Thale cress	peroxisome	87.93	88.53
KRH49397	Soybean	endoplasmic reticulum	73.58	80.15
Solyc10g085200.1.1	Tomato	peroxisome	75.17	79.14
KRH65710	Soybean	peroxisome	77.9	78.26
VIT_08s0105g00460.t01	Wine grape	peroxisome	79.5	78.25
KRH00268	Soybean	peroxisome	77.22	78.11
GSMUA_Achr8P21130_001	Banana	peroxisome	76.77	77.29
PGSC0003DMT400049359	Potato	peroxisome	77.22	77.22
Solyc10g076600.1.1	Tomato	peroxisome	77.22	77.22
PGSC0003DMT400028641	Potato	cytosol, mitochondrion, peroxisome	76.31	76.31
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	72.21	73.72
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	73.12	73.46
TraesCS1B01G129300.1	Wheat	peroxisome	73.12	73.46
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	72.44	73.44
Os01t0159400-01	Rice	nucleus	72.44	73.44
TraesCS1A01G110300.1	Wheat	peroxisome	72.89	73.23
Zm00001d037521_P002	Maize	peroxisome	72.89	72.73
OQU86270	Sorghum	peroxisome	72.21	72.54
OQU77505	Sorghum	peroxisome	71.53	71.85
Zm00001d039768_P003	Maize	mitochondrion	72.21	70.29
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	73.35	68.08
Bra010066.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.59	50.89
KRH75651	Soybean	extracellular	12.07	37.06
Bra038291.1-P	Field mustard	mitochondrion	22.32	23.96
Bra029606.1-P	Field mustard	cytosol	13.67	7.32

Protein Annotations

Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom
InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	EnsemblPlantsGene:Bra006879
EnsemblPlants:Bra006879.1	EnsemblPlants:Bra006879.1-P	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003995	GO:GO:0003997	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006635	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987
GO:GO:0016491	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	UniProt:M4CRN8
PFAM:PF00441	PFAM:PF02770	PFAM:PF02771	ScanProsite:PS00072	ScanProsite:PS00073	PANTHER:PTHR43188
PANTHER:PTHR43188:SF1	SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI0002542DA4	:	:

Description

AT3G51840 (E=2e-229) ACX4, ATSCX, ATG6 | ACX4 (ACYL-COA OXIDASE 4); acyl-CoA oxidase/ oxidoreductase

Coordinates

chrA09:-:25938931..25941690

Molecular Weight (calculated)

48163.2 Da

IEP (calculated)

8.526

GRAVY (calculated)

-0.094

Length

439 amino acids

Sequence
(BLAST)

001: MTVLSSRDRD EAEKKVKSSY FDLPAMDVSV AFPQATPASK FPPCTSDYYH FNELLTPEEQ DVRKRVREFM EKEVAPIMTE YWEKAEFPFH IIPKLGALGV
101: VGGSIKGYGC PGLSITANAI ATAEISRVDA SCGTFNLVHT SLGMLTIALC GSEEQKQKYL PSLAQLKTVT CWALTEPDNG SDASALQTTA TKVEGGWVLT
201: GQKRWIGNST FADLLIILAR NTTTNQVNGF IVKKDAPGLT VTKIPNKIGL RIVQNGDILL QNVFVPDEER LPGLNSFQDT SKVLAVSRVM VAWQPIGVSM
301: GVYDMCHRYL KERKQFGAPL AAFQINQQKL VKMLGNVQAM FLMGWRLCKL YESGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGIVG DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTAR EVTGIASFKP AASRSRSRL

Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)

001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL

Arabidopsis Description

ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.