Factsheet for Solyc10g076600.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049359	Potato	peroxisome	97.04	97.04
Solyc10g085200.1.1	Tomato	peroxisome	82.0	86.33
KRH65710	Soybean	peroxisome	79.95	80.32
KRH49397	Soybean	endoplasmic reticulum	73.35	79.9
VIT_08s0105g00460.t01	Wine grape	peroxisome	80.18	78.92
KRH00268	Soybean	peroxisome	77.22	78.11
AT3G51840.1	Thale cress	peroxisome	77.45	77.98
CDX78043	Canola	peroxisome	77.22	77.22
Bra006879.1-P	Field mustard	peroxisome	77.22	77.22
CDX95301	Canola	peroxisome	76.77	76.77
CDX73688	Canola	peroxisome	76.77	76.77
GSMUA_Achr8P21130_001	Banana	peroxisome	75.85	76.38
CDY23164	Canola	peroxisome	76.08	76.08
Os01t0159400-01	Rice	nucleus	74.03	75.06
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	73.35	74.88
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	73.8	74.83
OQU86270	Sorghum	peroxisome	73.8	74.14
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	73.8	74.14
TraesCS1B01G129300.1	Wheat	peroxisome	73.8	74.14
TraesCS1A01G110300.1	Wheat	peroxisome	73.58	73.91
Zm00001d037521_P002	Maize	peroxisome	73.8	73.64
OQU77505	Sorghum	peroxisome	70.84	71.17
Zm00001d039768_P003	Maize	mitochondrion	72.21	70.29
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	73.8	68.5
KRH75651	Soybean	extracellular	12.07	37.06
Solyc06g073560.2.1	Tomato	mitochondrion	23.92	25.49
Solyc11g069180.1.1	Tomato	plastid	23.23	24.76
Solyc01g066310.2.1	Tomato	nucleus	13.44	7.13
Solyc05g054370.2.1	Tomato	nucleus	13.44	7.12

Protein Annotations

Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom
InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	UniProt:K4D202
PFAM:PF00441	PFAM:PF02770	PFAM:PF02771	ScanProsite:PS00073	PANTHER:PTHR43188	PANTHER:PTHR43188:SF1
SUPFAM:SSF47203	SUPFAM:SSF56645	EnsemblPlantsGene:Solyc10g076600.1	EnsemblPlants:Solyc10g076600.1.1	UniParc:UPI0002769D99	:

Description

No Description!

Coordinates

chr10:-:59560828..59565291

Molecular Weight (calculated)

48318.8 Da

IEP (calculated)

8.060

GRAVY (calculated)

-0.013

Length

439 amino acids

Sequence
(BLAST)

001: MKVPPTKTQE EMYKEAKSSY FDLPALDVSV AFPQATPASV FPNCTSDYYQ LDDLLTSEEK AVRLKVRECM EKEIAPIMTK YWEKAEFPFE VIPKLGALNI
101: SGGTIKGYGC PGLSVTGSAI ALAEIARVDA SCCTFILVHS SLAMLTIGLL GSEMQRQKYL PSLADLSSIS CWGLTEPDYG SDASALRTTA TKVEGGWILE
201: GQKRWIGNST FADVLVIFAR NAATNQINGF IVQKDAPGLQ CTKIENKIGL RMVQNGDILF KKVFVPDEDR LPGVNSFNDT SKVLAVSRVM VAWLPIGIAM
301: GVYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLSNIQAM LLVGWRLCKL YESGKMTPGQ ASLGKSWNTL RARETVSLGR ELLGGNGILT DFLVAKAFCD
401: LEPIYTFEGT YDINTLVTGR EITGLPSFKP APLRPQSRL

Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)

001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL

Arabidopsis Description

ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.