Factsheet for GSMUA_Achr8P21130_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
plastid 2
peroxisome 4
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0105g00460.t01	Wine grape	peroxisome	82.57	80.72
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	79.59	80.7
Solyc10g085200.1.1	Tomato	peroxisome	77.06	80.58
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	79.36	79.91
Os01t0159400-01	Rice	nucleus	78.67	79.21
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	78.9	78.72
TraesCS1B01G129300.1	Wheat	peroxisome	78.9	78.72
KRH49397	Soybean	endoplasmic reticulum	72.71	78.66
Zm00001d037521_P002	Maize	peroxisome	79.36	78.64
TraesCS1A01G110300.1	Wheat	peroxisome	78.67	78.49
KRH65710	Soybean	peroxisome	78.21	78.03
AT3G51840.1	Thale cress	peroxisome	77.98	77.98
OQU86270	Sorghum	peroxisome	77.75	77.57
CDX73688	Canola	peroxisome	77.98	77.45
PGSC0003DMT400049359	Potato	peroxisome	77.52	76.99
CDX78043	Canola	peroxisome	77.52	76.99
KRH00268	Soybean	peroxisome	76.61	76.96
PGSC0003DMT400028641	Potato	cytosol, mitochondrion, peroxisome	77.29	76.77
Bra006879.1-P	Field mustard	peroxisome	77.29	76.77
OQU77505	Sorghum	peroxisome	76.38	76.2
CDX95301	Canola	peroxisome	76.61	76.08
Solyc10g076600.1.1	Tomato	peroxisome	76.38	75.85
CDY23164	Canola	peroxisome	76.38	75.85
Zm00001d039768_P003	Maize	mitochondrion	76.38	73.84
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	79.13	72.94
CDY59727	Canola	extracellular, peroxisome, plastid	11.24	38.28
KRH75651	Soybean	extracellular	11.24	34.27
CDY64742	Canola	cytosol, mitochondrion, plastid	13.53	34.1
Bra010066.1-P	Field mustard	cytosol, peroxisome, plasma membrane	11.93	30.77
CDX73320	Canola	plastid	14.91	27.08
GSMUA_Achr6P08800_001	Banana	mitochondrion	22.71	24.21
CDY59726	Canola	cytosol	1.83	9.3
GSMUA_Achr8P30030_001	Banana	cytosol	13.53	6.92

Protein Annotations

Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom
InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	GO:GO:0000003
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0003997	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629
GO:GO:0006635	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009790
GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016491	GO:GO:0016627	GO:GO:0050660
GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr8G21130_001	EnsemblPlants:GSMUA_Achr8P21130_001	EnsemblPlants:GSMUA_Achr8T21130_001	InterPro:IPR037069	UniProt:M0TSB6
PFAM:PF00441	PFAM:PF02770	PFAM:PF02771	ScanProsite:PS00073	PANTHER:PTHR43188	PANTHER:PTHR43188:SF1
SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI0002960841	SEG:seg	:	:

Description

Acyl-coenzyme A oxidase 4, peroxisomal [Source:GMGC_GENE;Acc:GSMUA_Achr8G21130_001]

Coordinates

chr8:-:26105308..26111941

Molecular Weight (calculated)

47333.4 Da

IEP (calculated)

8.975

GRAVY (calculated)

0.085

Length

436 amino acids

Sequence
(BLAST)

001: MASSNQDDHH MASMGSHSGL PPLNISVAFP QATPASVFPP SSSDYYQFDD LLNPEEQALR KRVRVVMEKE VAPIMAVYWE KAEFPFHVIP KLATLSIAGG
101: TIKGYGCPGL SITASAIATA EVARVDASCS TFILVHSSLA MLTIALCGSE AQKVKYLSSL AKFDTVACWA LTEPDYGSDA SSLRTTATKV SGGWVLDGQK
201: RWIGNSTFAD VLIVFARNTS TNQINGFIVK KGTPGLRVTK IENKIGLRIV QNGDIILNKV FVPDEDRLPG VNSFQDTSKV LAVSRVMVAW QPIGISMGVF
301: DMCNRYLKER KQFGAPLAAF QINQEKLVRM LGNIQAMLLV GWRLCKLYES GKMTAGHASL GKAWTSLKAR ETVSLGRELL GGNGILADFL VAKAFCDLEP
401: IFTYEGTYDI NSMVTAREIT GIASFKPAVL GRSSRL

Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)

001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL

Arabidopsis Description

ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.